RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TPP2P29144 1249 aaPredicted RBP9.76□□□□□ -0.85
CAPN1-225ENST00000533704 EEF1DP29692 281 aaKnown RBP9.76□□□□□ -0.85
CAPN1-225ENST00000533704 ARL1P40616 181 aaPredicted RBP9.76□□□□□ -0.85
CAPN1-225ENST00000533704 SSR2P43308 183 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 RCN2Q14257 317 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 TBCCQ15814 346 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 MAPKAPK3Q16644 382 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 AP5B1Q2VPB7 878 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 ADPRMQ3LIE5 342 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 ZNF468Q5VIY5 522 aaPredicted RBP9.76□□□□□ -0.85
CAPN1-225ENST00000533704 ZNF324BQ6AW86 544 aaPredicted RBP9.76□□□□□ -0.85
CAPN1-225ENST00000533704 MAMDC2Q7Z304 686 aaPredicted RBP9.76□□□□□ -0.85
CAPN1-225ENST00000533704 GALNTL5Q7Z4T8 443 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 SCUBE1Q8IWY4 988 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 RNF175Q8N4F7 328 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 MMGT1Q8N4V1 131 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 HORMAD2Q8N7B1 307 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 TMEM178AQ8NBL3 297 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 NFAM1Q8NET5 270 aaPredicted RBP9.76□□□□□ -0.85
CAPN1-225ENST00000533704 B3GNT7Q8NFL0 401 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 DNAJB8Q8NHS0 232 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 ADAMTS18Q8TE60 1221 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 ZNF473Q8WTR7 871 aaKnown RBP9.76□□□□□ -0.85
CAPN1-225ENST00000533704 UBTD2Q8WUN7 234 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 UBE2E3Q969T4 207 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 NCLNQ969V3 563 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 SCYL1Q96KG9 808 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 KCNC2Q96PR1 638 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 FMO2Q99518 471 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 CCDC77Q9BR77 488 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 SORBS1Q9BX66 1292 aaKnown RBP9.76□□□□□ -0.85
CAPN1-225ENST00000533704 MS4A8Q9BY19 250 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 OR51B5Q9H339 312 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 ACSS3Q9H6R3 686 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 ACTR8Q9H981 624 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 PRDM7Q9NQW5 492 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 COPG2Q9UBF2 871 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 DAPP1Q9UN19 280 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 IKBKGQ9Y6K9 419 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 NOTCH2Q04721 2471 aa9.76□□□□□ -0.85
CAPN1-225ENST00000533704 DNAJC13O75165 2243 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 A0A1B0GUH1 482 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 NPIPA5E9PKD4 350 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 FCHO1O14526 889 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 ZG16O60844 167 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 SLC25A12O75746 678 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 KLHL2O95198 593 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 CLDN1O95832 211 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 SP1P08047 785 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 MTHFD2P13995 350 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 TNNI3P19429 210 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 ATP5A1P25705 553 aaKnown RBP9.75□□□□□ -0.85
CAPN1-225ENST00000533704 CYB561P49447 251 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 CLCN2P51788 898 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 RAP1GDS1P52306 607 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 HSD17B7P56937 341 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 MLF1P58340 268 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 ALDH6A1Q02252 535 aaKnown RBP9.75□□□□□ -0.85
CAPN1-225ENST00000533704 ID2Q02363 134 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 STX4Q12846 297 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 SETDB1Q15047 1291 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 ACAP2Q15057 778 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 SLC25A25Q6KCM7 469 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 ZNF793Q6ZN11 406 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 CHSY3Q70JA7 882 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 TAOK1Q7L7X3 1001 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 CCDC91Q7Z6B0 441 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.75□□□□□ -0.85
CAPN1-225ENST00000533704 ZNF595Q8IYB9 648 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 LGI4Q8N135 537 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 TMEM156Q8N614 296 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 ACOT4Q8N9L9 421 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 FAM98AQ8NCA5 519 aaKnown RBP9.75□□□□□ -0.85
CAPN1-225ENST00000533704 SRFBP1Q8NEF9 429 aaKnown RBP9.75□□□□□ -0.85
CAPN1-225ENST00000533704 OR7G3Q8NG95 312 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 RHEBL1Q8TAI7 183 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 TMEM125Q96AQ2 219 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 VMP1Q96GC9 406 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 MAPKAP1Q9BPZ7 522 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 TBCDQ9BTW9 1192 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 ROGDIQ9GZN7 287 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 TSPYL1Q9H0U9 437 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 ADAP2Q9NPF8 381 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 ZNF358Q9NW07 568 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 NPIPA1Q9UND3 350 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 SPACA6W5XKT8 324 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 ZNF407Q9C0G0 2248 aa9.75□□□□□ -0.85
CAPN1-225ENST00000533704 UNC79Q9P2D8 2635 aa9.74□□□□□ -0.85
CAPN1-225ENST00000533704 WIPF3A6NGB9 483 aa9.74□□□□□ -0.85
CAPN1-225ENST00000533704 CYR61O00622 381 aa9.74□□□□□ -0.85
CAPN1-225ENST00000533704 CTNSO60931 367 aa9.74□□□□□ -0.85
CAPN1-225ENST00000533704 ABCB7O75027 752 aa9.74□□□□□ -0.85
CAPN1-225ENST00000533704 LDB3O75112 727 aa9.74□□□□□ -0.85
CAPN1-225ENST00000533704 NEURL1O76050 574 aa9.74□□□□□ -0.85
CAPN1-225ENST00000533704 WISP2O76076 250 aa9.74□□□□□ -0.85
CAPN1-225ENST00000533704 SIX3O95343 332 aaPredicted RBP9.74□□□□□ -0.85
CAPN1-225ENST00000533704 ALDOAP04075 364 aaKnown RBP9.74□□□□□ -0.85
CAPN1-225ENST00000533704 STSP08842 583 aa9.74□□□□□ -0.85
CAPN1-225ENST00000533704 CPN2P22792 545 aa9.74□□□□□ -0.85
CAPN1-225ENST00000533704 SERPINB1P30740 379 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms