RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 OR8D2Q9GZM6 311 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 ZDHHC11Q9H8X9 412 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 IL1RL2Q9HB29 575 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 TUBA8Q9NY65 449 aaPredicted RBP12.08□□□□□ -0.48
COPB1-209ENST00000533096 SLC22A14Q9Y267 594 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 MMACHCQ9Y4U1 282 aa12.08□□□□□ -0.48
COPB1-209ENST00000533096 TRGV5A0A0B4J1U4 118 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 A6NNC1 897 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 C4orf51C9J302 202 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 SYT5O00445 386 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 GLSO94925 669 aaPredicted RBP12.07□□□□□ -0.48
COPB1-209ENST00000533096 BMP5P22003 454 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 GABRB3P28472 473 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 PLA2G16P53816 162 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 SP140Q13342 867 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 PDAP1Q13442 181 aaKnown RBP12.07□□□□□ -0.48
COPB1-209ENST00000533096 SLC25A35Q3KQZ1 300 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 TMEM198Q66K66 360 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 RTL4Q6ZR62 310 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 CHSY3Q70JA7 882 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 STRA8Q7Z7C7 330 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 GPALPP1Q8IXQ4 340 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 GPATCH11Q8N954 259 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 SPC24Q8NBT2 197 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 ATL1Q8WXF7 558 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 SARAFQ96BY9 339 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 FBXL8Q96CD0 374 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 JSRP1Q96MG2 331 aaPredicted RBP12.07□□□□□ -0.48
COPB1-209ENST00000533096 SARGQ9BW04 601 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 ALOXE3Q9BYJ1 711 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 XAB2Q9HCS7 855 aaKnown RBP12.07□□□□□ -0.48
COPB1-209ENST00000533096 PPANQ9NQ55 473 aaKnown RBP12.07□□□□□ -0.48
COPB1-209ENST00000533096 DLL4Q9NR61 685 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 SACM1LQ9NTJ5 587 aa12.07□□□□□ -0.48
COPB1-209ENST00000533096 SCN3AQ9NY46 2000 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 A0A1B0GVC2 190 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 AQP7O14520 342 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 ERI3O43414 337 aaKnown RBP12.06□□□□□ -0.48
COPB1-209ENST00000533096 B3GALT2O43825 422 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 WDR1O75083 606 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 IGHG3P01860 377 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 AHSGP02765 367 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 SERPINA6P08185 405 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 CCL3P10147 92 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 TRPC1P48995 793 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 HK2P52789 917 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 WNT3P56703 355 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 HSD17B7P56937 341 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 STXBP1P61764 594 aaKnown RBP12.06□□□□□ -0.48
COPB1-209ENST00000533096 STX4Q12846 297 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 TMEM139Q8IV31 216 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 LMNTD2Q8IXW0 634 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 AGGF1Q8N302 714 aaeCLIP12.06□□□□□ -0.48
COPB1-209ENST00000533096 LINC01560Q8TB33 94 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 SIGLEC10Q96LC7 697 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 RUNDC3BQ96NL0 473 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 SERPINB12Q96P63 405 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 FAM167BQ9BTA0 163 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 AICDAQ9GZX7 198 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 EPB41L4BQ9H329 900 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 ADAP2Q9NPF8 381 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 DMRT3Q9NQL9 472 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 TRMT1Q9NXH9 659 aaKnown RBP12.06□□□□□ -0.48
COPB1-209ENST00000533096 SPRR3Q9UBC9 169 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 ZKSCAN5Q9Y2L8 839 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 KCNE2Q9Y6J6 123 aa12.06□□□□□ -0.48
COPB1-209ENST00000533096 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.06□□□□□ -0.48
COPB1-209ENST00000533096 SUSD5O60279 629 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 ZNF354AO60765 605 aaPredicted RBP12.05□□□□□ -0.48
COPB1-209ENST00000533096 MLNP12872 115 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 AGFG1P52594 562 aaKnown RBP12.05□□□□□ -0.48
COPB1-209ENST00000533096 AP1S2P56377 157 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 RAB38P57729 211 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 REEP5Q00765 189 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 ID2Q02363 134 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 FOXO1Q12778 655 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 ASPHQ12797 758 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 TERF2Q15554 542 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 DEFB113Q30KQ7 82 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 C18orf21Q32NC0 220 aaPredicted RBP12.05□□□□□ -0.48
COPB1-209ENST00000533096 OPN5Q6U736 354 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 CLEC9AQ6UXN8 241 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 CAMKMTQ7Z624 323 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 BIVMQ86UB2 503 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 SCUBE1Q8IWY4 988 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 KLHDC8AQ8IYD2 350 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 C2CD4AQ8NCU7 369 aaPredicted RBP12.05□□□□□ -0.48
COPB1-209ENST00000533096 MCUQ8NE86 351 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 DOK4Q8TEW6 326 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 PTPMT1Q8WUK0 201 aaPredicted RBP12.05□□□□□ -0.48
COPB1-209ENST00000533096 DAZLQ92904 295 aaKnown RBP12.05□□□□□ -0.48
COPB1-209ENST00000533096 MAGOHBQ96A72 148 aaKnown RBP12.05□□□□□ -0.48
COPB1-209ENST00000533096 KIAA1191Q96A73 305 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 LRRC46Q96FV0 321 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 C18orf12Q96KH6 178 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 ALPK1Q96QP1 1244 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 EGFL8Q99944 293 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 ZNF395Q9H8N7 513 aaPredicted RBP12.05□□□□□ -0.48
COPB1-209ENST00000533096 PELI2Q9HAT8 420 aa12.05□□□□□ -0.48
COPB1-209ENST00000533096 HOMER3Q9NSC5 361 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms