RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 GALR3O60755 368 aaPredicted RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 STK10O94804 968 aaKnown RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 MATN4O95460 622 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 SLC35G6P0C7Q6 338 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 TMEM253P0C7T8 217 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 PAX1P15863 534 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 CNR1P21554 472 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 CTSSP25774 331 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 CTNNA2P26232 953 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 ATP5DP30049 168 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 OPRM1P35372 400 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 CPA2P48052 419 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 ADARP55265 1226 aaKnown RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 TAP2Q03519 686 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 CRYZQ08257 329 aaKnown RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 VEZF1Q14119 521 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 GBX1Q14549 363 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 SLC10A1Q14973 349 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 HERC3Q15034 1050 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 ZNF750Q32MQ0 723 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 FASTKD1Q53R41 847 aaKnown RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 AARS2Q5JTZ9 985 aaKnown RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 WIPI1Q5MNZ9 446 aaPredicted RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 NSUN5P2Q63ZY6 315 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 PTRHD1Q6GMV3 140 aaKnown RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 BBS12Q6ZW61 710 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 OTOAQ7RTW8 1153 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 LDB1Q86U70 411 aaPredicted RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 SLC26A11Q86WA9 606 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.56□□□□□ -1.2
CD44-232ENST00000531118 LIX1Q8N485 282 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 AFAP1L2Q8N4X5 818 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 GOLM1Q8NBJ4 401 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 MBD3L2Q8NHZ7 208 aaPredicted RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 NEIL3Q8TAT5 605 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 ZNF480Q8WV37 535 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 IGFBPL1Q8WX77 278 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 TM4SF19Q96DZ7 209 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 PIK3IP1Q96FE7 263 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 MRFAP1L1Q96HT8 127 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 PDLIM2Q96JY6 352 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 SCYL1Q96KG9 808 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 PRAP1Q96NZ9 151 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 PANX2Q96RD6 677 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 PKP4Q99569 1192 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 FERMT1Q9BQL6 677 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 BHLHE41Q9C0J9 482 aaPredicted RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 P2RY12Q9H244 342 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 LRRC40Q9H9A6 602 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 LIN28AQ9H9Z2 209 aaKnown RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 NECTIN3Q9NQS3 549 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 SACM1LQ9NTJ5 587 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 CHMP5Q9NZZ3 219 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 PPIEQ9UNP9 301 aaKnown RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 SLC22A7Q9Y694 548 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 EXPH5Q8NEV8 1989 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 FREM1Q5H8C1 2179 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 KCNE1BA0A087WTH5 132 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 C15orf38-AP3S2A0A0A6YYH1 394 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 CASKO14936 926 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 KPNA5O15131 536 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 CTIFO43310 598 aaKnown RBP7.55□□□□□ -1.2
CD44-232ENST00000531118 CHST10O43529 356 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 SPOPO43791 374 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 ERN1O75460 977 aaKnown RBP7.55□□□□□ -1.2
CD44-232ENST00000531118 PSIP1O75475 530 aaKnown RBP7.55□□□□□ -1.2
CD44-232ENST00000531118 SLC16A8O95907 504 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 IL18BPO95998 194 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 B3GALT4O96024 378 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 CATP04040 527 aaKnown RBP7.55□□□□□ -1.2
CD44-232ENST00000531118 P04436 131 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 PPARGP37231 505 aaPredicted RBP7.55□□□□□ -1.2
CD44-232ENST00000531118 TRPC1P48995 793 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 HK2P52789 917 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 TBPL1P62380 186 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 SRSF2Q01130 221 aaKnown RBP7.55□□□□□ -1.2
CD44-232ENST00000531118 DEFB134Q4QY38 66 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 XKR6Q5GH73 641 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 CTSL3PQ5NE16 218 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 TSTD2Q5T7W7 516 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 THEMIS2Q5TEJ8 643 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 LUZP2Q86TE4 346 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 LRRC56Q8IYG6 542 aaPredicted RBP7.55□□□□□ -1.2
CD44-232ENST00000531118 ZNF740Q8NDX6 193 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 OR4L1Q8NH43 312 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 FBF1Q8TES7 1133 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 SREK1Q8WXA9 508 aaKnown RBP7.55□□□□□ -1.2
CD44-232ENST00000531118 PIGQQ9BRB3 760 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 ADAM19Q9H013 955 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 EPB41L4BQ9H329 900 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 FAM114A2Q9NRY5 505 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 ZNF701Q9NV72 531 aaPredicted RBP7.55□□□□□ -1.2
CD44-232ENST00000531118 MARCH4Q9P2E8 410 aaPredicted RBP7.55□□□□□ -1.2
CD44-232ENST00000531118 SH2B3Q9UQQ2 575 aa7.55□□□□□ -1.2
CD44-232ENST00000531118 YLPM1P49750 1951 aaKnown RBP7.54□□□□□ -1.2
CD44-232ENST00000531118 CD8B2A6NJW9 211 aa7.54□□□□□ -1.2
CD44-232ENST00000531118 A8MV72 311 aaPredicted RBP7.54□□□□□ -1.2
CD44-232ENST00000531118 AHRRA9YTQ3 701 aa7.54□□□□□ -1.2
CD44-232ENST00000531118 WWP2O00308 870 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms