RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 TGFB1P01137 390 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 GJA4P35212 333 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 CLCA4Q14CN2 919 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 EIF4HQ15056 248 aaKnown RBP11.07□□□□□ -0.64
USP35-207ENST00000530546 DUOXA1Q1HG43 343 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 BCL7AQ4VC05 210 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 CES5AQ6NT32 575 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 MED27Q6P2C8 311 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.07□□□□□ -0.64
USP35-207ENST00000530546 SLCO4C1Q6ZQN7 724 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 YAF2Q8IY57 180 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 FAM83FQ8NEG4 500 aaPredicted RBP11.07□□□□□ -0.64
USP35-207ENST00000530546 OR9A1PQ8NGU1 263 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 ST6GAL2Q96JF0 529 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 GDF15Q99988 308 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 DPH2Q9BQC3 489 aaPredicted RBP11.07□□□□□ -0.64
USP35-207ENST00000530546 GON7Q9BXV9 100 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 ATP13A2Q9NQ11 1180 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 RPRD1BQ9NQG5 326 aaKnown RBP11.07□□□□□ -0.64
USP35-207ENST00000530546 TM7SF3Q9NS93 570 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 C3orf18Q9UK00 162 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 MKLN1Q9UL63 735 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 TPRKBQ9Y3C4 175 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 CEP290O15078 2479 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 MGAT4DA6NG13 374 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 FAM220BPB1ANY3 271 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 C1QTNF3-AMACRE9PGA6 284 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 YES1P07947 543 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 NPPBP16860 134 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 JUNDP17535 347 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 PRIM2P49643 509 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 CASP9P55211 416 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 WNT3P56703 355 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 RAE1P78406 368 aaKnown RBP11.07□□□□□ -0.64
USP35-207ENST00000530546 RUNX3Q13761 415 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 PDGFRLQ15198 375 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 VN1R5Q7Z5H4 357 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 CELF2-AS1Q8N7Q2 184 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 PSD4Q8NDX1 1056 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 ZNF740Q8NDX6 193 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 OR5AR1Q8NGP9 310 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 RIPOR3Q96MK2 946 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 CENPOQ9BU64 300 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 DCSTAMPQ9H295 470 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 SPNS1Q9H2V7 528 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 OR51B5Q9H339 312 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 HCN2Q9UL51 889 aa11.07□□□□□ -0.64
USP35-207ENST00000530546 LOC100130705A0A1B0GUX0 176 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 EFCAB9A8MZ26 197 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 SHOXO15266 292 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 MID1O15344 667 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 KAT7O95251 611 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 MED26O95402 600 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 PAPLNO95428 1278 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 PRKACGP22612 351 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 FCARP24071 287 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 S100A5P33763 92 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 PIGAP37287 484 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 GZMMP51124 257 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 KCNAB2Q13303 367 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 SHHQ15465 462 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 SYCE2Q6PIF2 218 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 SPESP1Q6UW49 350 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 CALHM3Q86XJ0 350 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 GATAD2AQ86YP4 633 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 CHPFQ8IZ52 775 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 DUSP26Q9BV47 211 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 LGR4Q9BXB1 951 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 NXF2Q9GZY0 626 aaKnown RBP11.06□□□□□ -0.64
USP35-207ENST00000530546 LTB4R2Q9NPC1 389 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 DCAF13Q9NV06 445 aaKnown RBP11.06□□□□□ -0.64
USP35-207ENST00000530546 PAQR5Q9NXK6 330 aaPredicted RBP11.06□□□□□ -0.64
USP35-207ENST00000530546 SLC23A2Q9UGH3 650 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 PCDHGA10Q9Y5H3 936 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 PNMA8CA0A1B0GUJ8 204 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 GABRR3A8MPY1 467 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 SLC16A6O15403 523 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 PCDH7O60245 1069 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 EPN2O95208 641 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 PSMB9P28065 219 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 OR3A3P47888 321 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 SOX9P48436 509 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 AP2S1P53680 142 aaPredicted RBP11.06□□□□□ -0.64
USP35-207ENST00000530546 ERVK-21P61565 698 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 BNC1Q01954 994 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 SRSF11Q05519 484 aaKnown RBP11.06□□□□□ -0.64
USP35-207ENST00000530546 ABHD18Q0P651 414 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 TARDBPQ13148 414 aaKnown RBP eCLIP11.06□□□□□ -0.64
USP35-207ENST00000530546 RFX4Q33E94 735 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 ZNF658BQ4V348 819 aaPredicted RBP11.06□□□□□ -0.64
USP35-207ENST00000530546 TPRG1LQ5T0D9 272 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 CPTPQ5TA50 214 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 ANGPTL8Q6UXH0 198 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 GPR149Q86SP6 731 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 PARP16Q8N5Y8 322 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 AMER2Q8N7J2 671 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 PBX4Q9BYU1 374 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 DUSP21Q9H596 190 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 CCNB1IP1Q9NPC3 277 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 FBXL12Q9NXK8 326 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms