RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 GLIPR1P48060 266 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 CRIP2P52943 208 aaPredicted RBP5.27□□□□□ -1.57
PCF11-202ENST00000528336 BLMP54132 1417 aaPredicted RBP5.27□□□□□ -1.57
PCF11-202ENST00000528336 CX3CL1P78423 397 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 DDX39BQ13838 428 aaKnown RBP5.27□□□□□ -1.57
PCF11-202ENST00000528336 SYCP1Q15431 976 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 CBWD6Q4V339 395 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 FASTKD1Q53R41 847 aaKnown RBP5.27□□□□□ -1.57
PCF11-202ENST00000528336 CBWD3Q5JTY5 395 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 DCAF10Q5QP82 559 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 TAS2R42Q7RTR8 314 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 ISCA2Q86U28 154 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 SMG6Q86US8 1419 aaKnown RBP5.27□□□□□ -1.57
PCF11-202ENST00000528336 ZNF843Q8N446 348 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 PPFIBP2Q8ND30 876 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 OR10S1Q8NGN2 331 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 EXD1Q8NHP7 514 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 OLIG1Q8TAK6 271 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 TEKT4Q8WW24 435 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 NXNL1Q96CM4 212 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 NSL1Q96IY1 281 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 RMDN2Q96LZ7 410 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 GDAP1L1Q96MZ0 367 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 DUX3Q96PT4 197 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 HNRNPABQ99729 332 aaKnown RBP5.27□□□□□ -1.57
PCF11-202ENST00000528336 ZNF696Q9H7X3 374 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 ECT2Q9H8V3 914 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 A4GALTQ9NPC4 353 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 EQTNQ9NQ60 294 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 SMPD3Q9NY59 655 aaPredicted RBP5.27□□□□□ -1.57
PCF11-202ENST00000528336 VPS18Q9P253 973 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 IL17BQ9UHF5 180 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 MAB21L2Q9Y586 359 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 LMO7Q8WWI1 1683 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 CAMTA1Q9Y6Y1 1673 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 FLT4P35916 1363 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 PARD3Q8TEW0 1356 aa5.27□□□□□ -1.57
PCF11-202ENST00000528336 COL5A2P05997 1499 aaPredicted RBP5.26□□□□□ -1.57
PCF11-202ENST00000528336 NWD2Q9ULI1 1742 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 ANKRD26Q9UPS8 1709 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 ATRNO75882 1429 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 FAM230AA0A1W2PPH8 454 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 TRIM49BA6NDI0 452 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 E9PBE3 544 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 GAPDHSO14556 408 aaPredicted RBP5.26□□□□□ -1.57
PCF11-202ENST00000528336 POLR2DO15514 142 aaKnown RBP5.26□□□□□ -1.57
PCF11-202ENST00000528336 CELF2O95319 508 aaKnown RBP5.26□□□□□ -1.57
PCF11-202ENST00000528336 SLC16A8O95907 504 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 OR2T7P0C7T2 308 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 PATE4P0C8F1 98 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 PRSS56P0CW18 603 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 AREGP15514 252 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 PFKFB1P16118 471 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 ITIH1P19827 911 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 ACP1P24666 158 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 CTNNB1P35222 781 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 SLC9A3P48764 834 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 UCP2P55851 309 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 UBE2HP62256 183 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 LGALS3BPQ08380 585 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 RAPSNQ13702 412 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 RBM39Q14498 530 aaKnown RBP5.26□□□□□ -1.57
PCF11-202ENST00000528336 ZNF876PQ49A33 203 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 SPDYCQ5MJ68 293 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 ARHGAP17Q68EM7 881 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 SH2D5Q6ZV89 423 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 ZNF410Q86VK4 478 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 SIAH3Q8IW03 269 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 ZNF595Q8IYB9 648 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 ARHGAP24Q8N264 748 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 BBS5Q8N3I7 341 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 ZNF383Q8NA42 475 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 OR13J1Q8NGT2 312 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 CFAP61Q8NHU2 1237 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 C9orf43Q8TAL5 461 aaPredicted RBP5.26□□□□□ -1.57
PCF11-202ENST00000528336 MIPOL1Q8TD10 442 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 HSD17B8Q92506 261 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 SNRNP40Q96DI7 357 aaKnown RBP5.26□□□□□ -1.57
PCF11-202ENST00000528336 NRBF2Q96F24 287 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 LRRC3BQ96PB8 259 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 RAD9AQ99638 391 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 BTBD10Q9BSF8 475 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 INPP5KQ9BT40 448 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 EDEM2Q9BV94 578 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 CARD6Q9BX69 1037 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 OSBPL8Q9BZF1 889 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 LRRCC1Q9C099 1032 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 S1PR5Q9H228 398 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 ANKZF1Q9H8Y5 726 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 LRRC40Q9H9A6 602 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 PIH1D3Q9NQM4 214 aaKnown RBP5.26□□□□□ -1.57
PCF11-202ENST00000528336 EXOC1Q9NV70 894 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 B3GAT1Q9P2W7 334 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 POLKQ9UBT6 870 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 DNPEPQ9ULA0 475 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 MTUS1Q9ULD2 1270 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 COL18A1P39060 1754 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 INSRP06213 1382 aa5.26□□□□□ -1.57
PCF11-202ENST00000528336 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.26□□□□□ -1.57
PCF11-202ENST00000528336 RNF123Q5XPI4 1314 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms