RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 FAM122AQ96E09 287 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 CASD1Q96PB1 797 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 GCNAQ96QF7 691 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 ALKBH7Q9BT30 221 aaPredicted RBP1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 KRTAP4-1Q9BYQ7 146 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 CUEDC2Q9H467 287 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 IKZF5Q9H5V7 419 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 UBE2TQ9NPD8 197 aaPredicted RBP1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 IARS2Q9NSE4 1012 aaKnown RBP1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 MRGBPQ9NV56 204 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 TMOD3Q9NYL9 352 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 MRPL15Q9P015 296 aaKnown RBP1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 UBQLN2Q9UHD9 624 aa1.53□□□□□ -2.16
ECHDC1-219ENST00000526299 TRAV18A0A075B6X5 111 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 IGHV3-35A0A0C4DH35 117 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 TMCO5BA8MYB1 307 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 TRIM49D1C9J1S8 452 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 MCF2LO15068 1137 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 SPRY1O43609 319 aaPredicted RBP1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 OR52Z1P0C646 297 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 SLC35E2P0CK97 266 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 EPORP19235 508 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 SSTR1P30872 391 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 ID1P41134 155 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 TRPC1P48995 793 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 LIG4P49917 911 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 PPOXP50336 477 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 P2RY4P51582 365 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 MTCP1P56278 107 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 RBPJQ06330 500 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 ACSM1Q08AH1 577 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 CNTN1Q12860 1018 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 EPS8Q12929 822 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 IL11RAQ14626 422 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 MAPK11Q15759 364 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 RFTN2Q52LD8 501 aaPredicted RBP1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 RFPL4BQ6ZWI9 263 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 MFN1Q8IWA4 741 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 TC2NQ8N9U0 490 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 CD99L2Q8TCZ2 262 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 VN1R17PQ8TDU5 208 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 SMPDL3AQ92484 453 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 VSIG2Q96IQ7 327 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 SERINC2Q96SA4 455 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 TBX15Q96SF7 602 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 GHITMQ9H3K2 345 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 DPEP2Q9H4A9 486 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 NT5DC2Q9H857 520 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 PDE7BQ9NP56 450 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 TMEM9Q9P0T7 183 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 ADD3Q9UEY8 706 aaKnown RBP1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 KLHL21Q9UJP4 597 aa1.52□□□□□ -2.17
ECHDC1-219ENST00000526299 PTCH1Q13635 1447 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 hCG_1807616A0A1W2PRN6 198 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 GLOD5A6NK44 160 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 EMC8O43402 210 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 WISP3O95389 354 aaPredicted RBP1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 CALCAP01258 141 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 ABCB1P08183 1280 aaPredicted RBP1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 EEF2P13639 858 aaKnown RBP1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 PPP2R1AP30153 589 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 HOXD13P35453 343 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 EIF2DP41214 584 aaKnown RBP1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 WTAPQ15007 396 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 ZNF658Q5TYW1 1059 aaPredicted RBP1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 ZNF691Q5VV52 312 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 KRT39Q6A163 491 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 CCDC70Q6NSX1 233 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 ABRAXAS1Q6UWZ7 409 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 C2orf66Q6UXQ4 117 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 TGIF2LYQ8IUE0 185 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 C14orf178Q8N769 122 aaPredicted RBP1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 ZNF671Q8TAW3 534 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 SLC26A7Q8TE54 656 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 SNRNP27Q8WVK2 155 aaKnown RBP1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 OR5M11Q96RB7 305 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 KLHL4Q9C0H6 718 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 C10orf88Q9H8K7 445 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 AMBNQ9NP70 447 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 ZNF446Q9NWS9 450 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 CLIC5Q9NZA1 410 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 SPG21Q9NZD8 308 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 SH3GLB1Q9Y371 365 aa1.51□□□□□ -2.17
ECHDC1-219ENST00000526299 HEG1Q9ULI3 1381 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 IGKV2-28A0A075B6P5 120 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 hCG_1809904A0A1W2PP81 198 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 A0A1W2PPE2 198 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 A0A1W2PPW3 197 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 A0A1W2PR64 198 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 EFCAB7A8K855 629 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 ZNF724A8MTY0 619 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 TMEM150CB9EJG8 249 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 PGRMC2O15173 223 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 SH3BP5O60239 455 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 CELF2O95319 508 aaKnown RBP1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 PRAMEF12O95522 483 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 FGF19O95750 216 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 IGKV2D-28P01615 120 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 HSD17B1P14061 328 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 HNRNPA2B1P22626 353 aaKnown RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms