RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 OR52B6Q8NGF0 335 aa11.52□□□□□ -0.57
CHKA-203ENST00000525155 GAL3ST3Q96A11 431 aa11.52□□□□□ -0.57
CHKA-203ENST00000525155 C10orf90Q96M02 699 aa11.52□□□□□ -0.57
CHKA-203ENST00000525155 IP6K3Q96PC2 410 aa11.52□□□□□ -0.57
CHKA-203ENST00000525155 FRG2BQ96QU4 278 aa11.52□□□□□ -0.57
CHKA-203ENST00000525155 REXO4Q9GZR2 422 aaKnown RBP11.52□□□□□ -0.57
CHKA-203ENST00000525155 SLC26A1Q9H2B4 701 aa11.52□□□□□ -0.57
CHKA-203ENST00000525155 SPNS1Q9H2V7 528 aa11.52□□□□□ -0.57
CHKA-203ENST00000525155 C12orf65Q9H3J6 166 aaKnown RBP11.52□□□□□ -0.57
CHKA-203ENST00000525155 GSTO2Q9H4Y5 243 aa11.52□□□□□ -0.57
CHKA-203ENST00000525155 ZNF304Q9HCX3 659 aa11.52□□□□□ -0.57
CHKA-203ENST00000525155 ATP13A2Q9NQ11 1180 aa11.52□□□□□ -0.57
CHKA-203ENST00000525155 FBXL4Q9UKA2 621 aa11.52□□□□□ -0.57
CHKA-203ENST00000525155 NXT1Q9UKK6 140 aaKnown RBP11.52□□□□□ -0.57
CHKA-203ENST00000525155 RNF11Q9Y3C5 154 aa11.52□□□□□ -0.57
CHKA-203ENST00000525155 MAU2Q9Y6X3 613 aa11.52□□□□□ -0.57
CHKA-203ENST00000525155 ANKRD12Q6UB98 2062 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 LRIT2A6NDA9 550 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 PEX12O00623 359 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 P2RX6O15547 441 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 ULK1O75385 1050 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 KLHL18O94889 574 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 DHRS4L1P0CG22 281 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 HSD3B1P14060 373 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 FBLP22087 321 aaKnown RBP11.51□□□□□ -0.57
CHKA-203ENST00000525155 HSD3B2P26439 372 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 HMOX2P30519 316 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 OCA2Q04671 838 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 CUL3Q13618 768 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 ADPRMQ3LIE5 342 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 PARP9Q8IXQ6 854 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 ARHGEF39Q8N4T4 335 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 AFAP1L2Q8N4X5 818 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 GBP7Q8N8V2 638 aaPredicted RBP11.51□□□□□ -0.57
CHKA-203ENST00000525155 CLEC1AQ8NC01 280 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 KCT2Q8NC54 265 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 CATSPER1Q8NEC5 780 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 OR2L5Q8NG80 312 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 HUS1BQ8NHY5 278 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 RAB3IL1Q8TBN0 382 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 METTL6Q8TCB7 284 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 ZNF473Q8WTR7 871 aaKnown RBP11.51□□□□□ -0.57
CHKA-203ENST00000525155 ARL8AQ96BM9 186 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 MMABQ96EY8 250 aaPredicted RBP11.51□□□□□ -0.57
CHKA-203ENST00000525155 KCNC2Q96PR1 638 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 SERPINI1Q99574 410 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 TBCDQ9BTW9 1192 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 GATA5Q9BWX5 397 aaPredicted RBP11.51□□□□□ -0.57
CHKA-203ENST00000525155 SOX17Q9H6I2 414 aaPredicted RBP11.51□□□□□ -0.57
CHKA-203ENST00000525155 WDR54Q9H977 334 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 BRF2Q9HAW0 419 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 MID1IP1Q9NPA3 183 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 AHSPQ9NZD4 102 aa11.51□□□□□ -0.57
CHKA-203ENST00000525155 MDC1Q14676 2089 aaKnown RBP11.5□□□□□ -0.57
CHKA-203ENST00000525155 CSMD1Q96PZ7 3565 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 TMEM114B3SHH9 223 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 DYNC1I1O14576 645 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 CHEK2O96017 543 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 SERPINE1P05121 402 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 UROSP10746 265 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 RCN2Q14257 317 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 TOR1AIP1Q5JTV8 583 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 DEPDC1Q5TB30 811 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 KHDRBS2Q5VWX1 349 aaKnown RBP11.5□□□□□ -0.57
CHKA-203ENST00000525155 ZNF787Q6DD87 383 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 LETMD1Q6P1Q0 360 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 CDYL2Q8N8U2 506 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 ANKRD42Q8N9B4 389 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 OR11G2Q8NGC1 345 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 WDR20Q8TBZ3 569 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 UTP15Q8TED0 518 aaKnown RBP11.5□□□□□ -0.57
CHKA-203ENST00000525155 AGAP11Q8TF27 550 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 PSMF1Q92530 271 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 RGMAQ96B86 450 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 NACC2Q96BF6 587 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 MS4A6EQ96DS6 147 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 VPS50Q96JG6 964 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 CDK15Q96Q40 435 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 PAIP2Q9BPZ3 127 aaKnown RBP11.5□□□□□ -0.57
CHKA-203ENST00000525155 NPLQ9BXD5 320 aaPredicted RBP11.5□□□□□ -0.57
CHKA-203ENST00000525155 MS4A8Q9BY19 250 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 COPS7BQ9H9Q2 264 aaPredicted RBP11.5□□□□□ -0.57
CHKA-203ENST00000525155 MKKSQ9NPJ1 570 aaPredicted RBP11.5□□□□□ -0.57
CHKA-203ENST00000525155 MED4Q9NPJ6 270 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 DMRT3Q9NQL9 472 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 PFDN4Q9NQP4 134 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 C14orf105Q9NVL8 296 aa11.5□□□□□ -0.57
CHKA-203ENST00000525155 ZNF282Q9UDV7 671 aaPredicted RBP11.5□□□□□ -0.57
CHKA-203ENST00000525155 COPG1Q9Y678 874 aaKnown RBP11.5□□□□□ -0.57
CHKA-203ENST00000525155 A0A0A6YYC8 382 aaPredicted RBP11.49□□□□□ -0.57
CHKA-203ENST00000525155 SERTM1A2A2V5 107 aa11.49□□□□□ -0.57
CHKA-203ENST00000525155 I3L1I5 382 aaPredicted RBP11.49□□□□□ -0.57
CHKA-203ENST00000525155 FFAR3O14843 346 aa11.49□□□□□ -0.57
CHKA-203ENST00000525155 PCDH17O14917 1159 aa11.49□□□□□ -0.57
CHKA-203ENST00000525155 GPR42O15529 346 aa11.49□□□□□ -0.57
CHKA-203ENST00000525155 ERI3O43414 337 aaKnown RBP11.49□□□□□ -0.57
CHKA-203ENST00000525155 FOXS1O43638 330 aa11.49□□□□□ -0.57
CHKA-203ENST00000525155 GALR3O60755 368 aaPredicted RBP11.49□□□□□ -0.57
CHKA-203ENST00000525155 SASH3O75995 380 aa11.49□□□□□ -0.57
CHKA-203ENST00000525155 WISP2O76076 250 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms