RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 CRB2Q5IJ48 1285 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 BCL2L15Q5TBC7 163 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 HSDL2Q6YN16 418 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 CALHM3Q86XJ0 350 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 FAM20CQ8IXL6 584 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 ADGRG2Q8IZP9 1017 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 APH1BQ8WW43 257 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 GATAD2BQ8WXI9 593 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 FUBP3Q96I24 572 aaKnown RBP eCLIP8.66□□□□□ -1.02
CSMD1-212ENST00000523387 ZFP3Q96NJ6 502 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 QRFPRQ96P65 431 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 CHIAQ9BZP6 476 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 ABCG5Q9H222 651 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 GALNT9Q9HCQ5 603 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 ADARB2Q9NS39 739 aaKnown RBP8.66□□□□□ -1.02
CSMD1-212ENST00000523387 GKN1Q9NS71 199 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 GLTPQ9NZD2 209 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 NDUFAF4Q9P032 175 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 EXTL2Q9UBQ6 330 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 UBR3Q6ZT12 1888 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 SLC35F4A4IF30 521 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 ZNF670-ZNF695F2Z2N8 137 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 TOXO94900 526 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 HLA-EP13747 358 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 CPN2P22792 545 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 CHMP24386 653 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 SLC6A4P31645 630 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 PCGF2P35227 344 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 RPL3P39023 403 aaKnown RBP8.66□□□□□ -1.02
CSMD1-212ENST00000523387 MANFP55145 182 aaKnown RBP8.66□□□□□ -1.02
CSMD1-212ENST00000523387 ASAH1Q13510 395 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 COMMD7Q86VX2 200 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 SLC38A6Q8IZM9 456 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 IQCF1Q8N6M8 205 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 ZNF557Q8N988 423 aaPredicted RBP8.66□□□□□ -1.02
CSMD1-212ENST00000523387 XAGE5Q8WWM1 108 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 SLC39A13Q96H72 371 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 ZNF607Q96SK3 696 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 RTP3Q9BQQ7 232 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 HTATIP2Q9BUP3 242 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 GTPBP2Q9BX10 602 aaKnown RBP8.66□□□□□ -1.02
CSMD1-212ENST00000523387 GABARAPL3Q9BY60 117 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 SRRQ9GZT4 340 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 ENAMQ9NRM1 1142 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 CD84Q9UIB8 345 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 MED16Q9Y2X0 877 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 PRSS21Q9Y6M0 314 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 MYO10Q9HD67 2058 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 A0A1W2PRB8 838 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 OR2AG2A6NM03 316 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 RFPL3O75679 317 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 PDGFAP04085 211 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 SCG5P05408 212 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 BCHEP06276 602 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 ANXA3P12429 323 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 GPX2P18283 190 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 CELP19835 753 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 GKP32189 559 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 BUD31P41223 144 aaPredicted RBP8.66□□□□□ -1.02
CSMD1-212ENST00000523387 CCL23P55773 120 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 DSTNP60981 165 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 HOXC5Q00444 222 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 ZNF630Q2M218 657 aaPredicted RBP8.66□□□□□ -1.02
CSMD1-212ENST00000523387 FLYWCH1Q4VC44 716 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 GARNL3Q5VVW2 1013 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 MEDAGQ5VYS4 303 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 FAM205BPQ63HN1 556 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 CREB3L2Q70SY1 520 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 CCDC71Q8IV32 467 aaPredicted RBP8.66□□□□□ -1.02
CSMD1-212ENST00000523387 TTC9BQ8N6N2 239 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 TP53I13Q8NBR0 393 aaPredicted RBP8.66□□□□□ -1.02
CSMD1-212ENST00000523387 GALNT11Q8NCW6 608 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 PDLIM5Q96HC4 596 aaKnown RBP8.66□□□□□ -1.02
CSMD1-212ENST00000523387 ZNF226Q9NYT6 803 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 KLHL21Q9UJP4 597 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 BAIAP2Q9UQB8 552 aa8.66□□□□□ -1.02
CSMD1-212ENST00000523387 IRGMA1A4Y4 181 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 PGRMC2O15173 223 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 HMGCLP35914 325 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 HNMTP50135 292 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 EFR3AQ14156 821 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 IHHQ14623 411 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 GINS1Q14691 196 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 DUSP7Q16829 419 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 YIF1BQ5BJH7 314 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 CLEC12AQ5QGZ9 265 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 GLCCI1Q86VQ1 547 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 KIF18BQ86Y91 864 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 PIAS4Q8N2W9 510 aaPredicted RBP8.65□□□□□ -1.02
CSMD1-212ENST00000523387 NXPE1Q8N323 547 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 NEIL3Q8TAT5 605 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 ZNF671Q8TAW3 534 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 SLC9A6Q92581 669 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 DPF3Q92784 378 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 LRR1Q96L50 414 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 ATP13A2Q9NQ11 1180 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 RBFOX1Q9NWB1 397 aaKnown RBP8.65□□□□□ -1.02
CSMD1-212ENST00000523387 ENPP4Q9Y6X5 453 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 NRXN2Q9P2S2 1712 aa8.65□□□□□ -1.02
CSMD1-212ENST00000523387 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms