RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 CASC4Q6P4E1 433 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 ARHGAP11AQ6P4F7 1023 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 MICALCLQ6ZW33 695 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 GSTA5Q7RTV2 222 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 LDB1Q86U70 411 aaPredicted RBP5.84□□□□□ -1.47
PABPC1-220ENST00000522658 RPS19BP1Q86WX3 136 aaKnown RBP5.84□□□□□ -1.47
PABPC1-220ENST00000522658 VSTM4Q8IW00 320 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 MMP21Q8N119 569 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 CYP4Z2PQ8N1L4 340 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 CPSF7Q8N684 471 aaKnown RBP5.84□□□□□ -1.47
PABPC1-220ENST00000522658 GPATCH11Q8N954 259 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 PPFIBP2Q8ND30 876 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 FAM57AQ8TBR7 257 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 CREB3L4Q8TEY5 395 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 NINJ1Q92982 152 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 PEX11GQ96HA9 241 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 OR1F2PQ96R84 312 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 OLFM1Q99784 485 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 TM9SF2Q99805 663 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 POLDIP3Q9BY77 421 aaKnown RBP5.84□□□□□ -1.47
PABPC1-220ENST00000522658 DEFB126Q9BYW3 111 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 FAM129AQ9BZQ8 928 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 IL22Q9GZX6 179 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 PCBD2Q9H0N5 130 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 EXO5Q9H790 373 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 PAK5Q9P286 719 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 ZNF148Q9UQR1 794 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 DRG1Q9Y295 367 aaKnown RBP5.84□□□□□ -1.47
PABPC1-220ENST00000522658 COMMD10Q9Y6G5 202 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 DOCK10Q96BY6 2186 aa5.84□□□□□ -1.47
PABPC1-220ENST00000522658 APCP25054 2843 aa5.84□□□□□ -1.48
PABPC1-220ENST00000522658 A0A1B0GTH9 108 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 ZNF860A6NHJ4 632 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 TMEM200CA6NKL6 621 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 A8MVJ9 347 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 ARHGEF33A8MVX0 844 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 H7BY64 318 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 SGK494L7N484 410 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 MYO1CO00159 1063 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 P2RX6O15547 441 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 NDUFS4O43181 175 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 FOXS1O43638 330 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 HS6ST1O60243 411 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 NME2P1O60361 137 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 AVILO75366 819 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 SLC16A8O95907 504 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 FHP07954 510 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 KLK2P20151 261 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 CCND1P24385 295 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 TACR1P25103 407 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 ADSLP30566 484 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-220ENST00000522658 PTGER1P34995 402 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 RFC3P40938 356 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 ITGA8P53708 1063 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 SLC26A5P58743 744 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 MEF2AQ02078 507 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-220ENST00000522658 MSLNQ13421 630 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-220ENST00000522658 THOC5Q13769 683 aaKnown RBP5.83□□□□□ -1.48
PABPC1-220ENST00000522658 SEMA3AQ14563 771 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 KLHL38Q2WGJ6 581 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 CCSMST1Q4G0I0 132 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 ZNF534Q76KX8 674 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 ABHD13Q7L211 337 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 WDR53Q7Z5U6 358 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-220ENST00000522658 ASPGQ86U10 573 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 C17orf64Q86WR6 236 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 DOLPP1Q86YN1 238 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 TGIF2LYQ8IUE0 185 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 PLD3Q8IV08 490 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 KLHDC8BQ8IXV7 354 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 GABPB2Q8TAK5 448 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-220ENST00000522658 SEC16BQ96JE7 1060 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 IMMP1LQ96LU5 166 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 PRAP1Q96NZ9 151 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 OR2A5Q96R48 311 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 DMRTA2Q96SC8 542 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 FOXC2Q99958 501 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 FRMD8P1Q9BZ68 369 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-220ENST00000522658 TMPRSS5Q9H3S3 457 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 LDAHQ9H6V9 325 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 CCM2LQ9NUG4 571 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-220ENST00000522658 HPF1Q9NWY4 346 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 FBXW2Q9UKT8 454 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 RNF6Q9Y252 685 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 R3HDM2Q9Y2K5 976 aaKnown RBP5.83□□□□□ -1.48
PABPC1-220ENST00000522658 CELSR1Q9NYQ6 3014 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 PKDREJQ9NTG1 2253 aa5.83□□□□□ -1.48
PABPC1-220ENST00000522658 POLQO75417 2590 aa5.82□□□□□ -1.48
PABPC1-220ENST00000522658 A0A088AWK7 358 aa5.82□□□□□ -1.48
PABPC1-220ENST00000522658 TRBV11-1A0A0K0K1C0 115 aa5.82□□□□□ -1.48
PABPC1-220ENST00000522658 A0A1W2PPV9 198 aa5.82□□□□□ -1.48
PABPC1-220ENST00000522658 SAGE2PA6NJ88 616 aa5.82□□□□□ -1.48
PABPC1-220ENST00000522658 MAGEB17A8MXT2 336 aa5.82□□□□□ -1.48
PABPC1-220ENST00000522658 BCKDKO14874 412 aa5.82□□□□□ -1.48
PABPC1-220ENST00000522658 PEX1O43933 1283 aa5.82□□□□□ -1.48
PABPC1-220ENST00000522658 B4GALT2O60909 372 aa5.82□□□□□ -1.48
PABPC1-220ENST00000522658 NIPSNAP2O75323 286 aa5.82□□□□□ -1.48
PABPC1-220ENST00000522658 PSIP1O75475 530 aaKnown RBP5.82□□□□□ -1.48
PABPC1-220ENST00000522658 SNRNP200O75643 2136 aaKnown RBP5.82□□□□□ -1.48
PABPC1-220ENST00000522658 NEURL1O76050 574 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms