RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 TMEM44Q2T9K0 475 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 DCAF4L1Q3SXM0 396 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 OR7E24Q6IFN5 339 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 CAPN13Q6MZZ7 669 aaPredicted RBP3.74□□□□□ -1.81
SKP1-209ENST00000522552 NAPRTQ6XQN6 538 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 SCARA5Q6ZMJ2 495 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 VTCN1Q7Z7D3 282 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 EFCAB13Q8IY85 973 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 GRHL3Q8TE85 626 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 SLC25A43Q8WUT9 341 aaPredicted RBP3.74□□□□□ -1.81
SKP1-209ENST00000522552 RPL3LQ92901 407 aaKnown RBP3.74□□□□□ -1.81
SKP1-209ENST00000522552 TMEM18Q96B42 140 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 ART5Q96L15 291 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 CCDC17Q96LX7 622 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 SPATA16Q9BXB7 569 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 TRIM9Q9C026 710 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 FBXO44Q9H4M3 255 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 ANKRA2Q9H9E1 313 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 NUDT15Q9NV35 164 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 ERRFI1Q9UJM3 462 aaPredicted RBP3.74□□□□□ -1.81
SKP1-209ENST00000522552 TBC1D24Q9ULP9 559 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 PIGLQ9Y2B2 252 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 PCDH11YQ9BZA8 1340 aa3.74□□□□□ -1.81
SKP1-209ENST00000522552 A0A1W2PPC1 479 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 UNC119BA6NIH7 251 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 C17orf105B2RV13 164 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 ZSCAN12O43309 604 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 TLX3O43711 291 aaPredicted RBP3.73□□□□□ -1.81
SKP1-209ENST00000522552 SNX3O60493 162 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 DFFBO76075 338 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 FARP2O94887 1054 aaPredicted RBP3.73□□□□□ -1.81
SKP1-209ENST00000522552 KRT19P08727 400 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 UMPSP11172 480 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 BMP7P18075 431 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 GJB2P29033 226 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 BDKRB2P30411 391 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 SRD5A2P31213 254 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 ALDH3B1P43353 468 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 BCAP31P51572 246 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 PGGT1BP53609 377 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 CTSCP53634 463 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 CDH4P55283 916 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 CLDN20P56880 219 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 TAS2R38P59533 333 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 MERTKQ12866 999 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 NME3Q13232 169 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 XKR7Q5GH72 579 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 C11orf63Q6NUN7 778 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 TMEM71Q6P5X7 295 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 TRIM65Q6PJ69 517 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 KCTD8Q6ZWB6 473 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 SLC22A16Q86VW1 577 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 COMMD2Q86X83 199 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 FOXRED2Q8IWF2 684 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 ASCC1Q8N9N2 400 aaKnown RBP3.73□□□□□ -1.81
SKP1-209ENST00000522552 ACVR1CQ8NER5 493 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 OR4K1Q8NGD4 311 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 OR4K14Q8NGD5 310 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 OR13F1Q8NGS4 319 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 PAQR8Q8TEZ7 354 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 GLYATL2Q8WU03 294 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 SPRYD4Q8WW59 207 aaPredicted RBP3.73□□□□□ -1.81
SKP1-209ENST00000522552 COQ8BQ96D53 544 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 HPDLQ96IR7 371 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 WRAP53Q9BUR4 548 aaKnown RBP3.73□□□□□ -1.81
SKP1-209ENST00000522552 RBM24Q9BX46 236 aaKnown RBP3.73□□□□□ -1.81
SKP1-209ENST00000522552 GSDMCQ9BYG8 508 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 ANKRD60Q9BZ19 345 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 SPRTNQ9H040 489 aaPredicted RBP3.73□□□□□ -1.81
SKP1-209ENST00000522552 MEGF9Q9H1U4 602 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 GANQ9H2C0 597 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 PNRC2Q9NPJ4 139 aaKnown RBP3.73□□□□□ -1.81
SKP1-209ENST00000522552 SLC2A8Q9NY64 477 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 FAM53CQ9NYF3 392 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 FBXL2Q9UKC9 423 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 CA5BQ9Y2D0 317 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 LOXL2Q9Y4K0 774 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 KLF2Q9Y5W3 355 aaPredicted RBP3.73□□□□□ -1.81
SKP1-209ENST00000522552 GAKO14976 1311 aa3.73□□□□□ -1.81
SKP1-209ENST00000522552 LOC105371242A0A075B767 164 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.72□□□□□ -1.81
SKP1-209ENST00000522552 LRRC3CA6NJW4 275 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 SNTNA6NMZ2 147 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 C12orf71A8MTZ7 269 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 RHODO00212 210 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 HAS3O00219 553 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 CHEK1O14757 476 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 POLR1CO15160 346 aaPredicted RBP3.72□□□□□ -1.81
SKP1-209ENST00000522552 MPPED1O15442 326 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 TIMM8AO60220 97 aaPredicted RBP3.72□□□□□ -1.81
SKP1-209ENST00000522552 CLN5O75503 358 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 SORBS2O94875 1100 aaKnown RBP3.72□□□□□ -1.81
SKP1-209ENST00000522552 CAVIN2O95810 425 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 PLAUP00749 431 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 EPOP01588 193 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 TPM3P06753 285 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 IGFBP1P08833 259 aaPredicted RBP3.72□□□□□ -1.81
SKP1-209ENST00000522552 ENO3P13929 434 aaPredicted RBP3.72□□□□□ -1.81
SKP1-209ENST00000522552 MSR1P21757 451 aa3.72□□□□□ -1.81
SKP1-209ENST00000522552 TNFSF8P32971 234 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms