RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ZNF676Q8N7Q3 588 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 ELOA3Q8NG57 546 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 PLAC1Q9HBJ0 212 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 TIGARQ9NQ88 270 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 ABCD2Q9UBJ2 740 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 MBLAC1A4D2B0 266 aaPredicted RBP13.29□□□□□ -0.28
SYNPO-205ENST00000522122 DLGAP1O14490 977 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 TSPAN6O43657 245 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 ITGA10O75578 1167 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 OAZ2O95190 189 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 STATHP02808 62 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 ACADLP28330 430 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 ADAM15Q13444 863 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 C2orf27AQ580R0 203 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 PLEKHG7Q6ZR37 379 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 RETREG3Q86VR2 466 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 CELF5Q8N6W0 485 aaKnown RBP13.29□□□□□ -0.28
SYNPO-205ENST00000522122 METTL21AQ8WXB1 218 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 FRMD6Q96NE9 622 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 UHRF1Q96T88 793 aaPredicted RBP13.29□□□□□ -0.28
SYNPO-205ENST00000522122 CHIAQ9BZP6 476 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 CERS4Q9HA82 394 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 TBC1D24Q9ULP9 559 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 KMOO15229 486 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 LMAN2Q12907 356 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 CLCA4Q14CN2 919 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 CYP27C1Q4G0S4 372 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 TMCO2Q7Z6W1 182 aaPredicted RBP13.29□□□□□ -0.28
SYNPO-205ENST00000522122 GHDCQ8N2G8 530 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 PNPLA1Q8N8W4 532 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 GRHL3Q8TE85 626 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 GLYATL1Q969I3 302 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 GAL3ST1Q99999 423 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 LGR4Q9BXB1 951 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 CSNK1G1Q9HCP0 422 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 ATF6P18850 670 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 PUDPQ08623 228 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 DSG2Q14126 1118 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 TRAM2Q15035 370 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 PGBD2Q6P3X8 592 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 ZNF613Q6PF04 617 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 HSDL2Q6YN16 418 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 Q6ZNX1 250 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 ABHD13Q7L211 337 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 NR4A3Q92570 626 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 GPR78Q96P69 363 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 PHOX2BQ99453 314 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 SLC38A3Q99624 504 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 C14orf105Q9NVL8 296 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 MKL2Q9ULH7 1088 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 TMEM98Q9Y2Y6 226 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 ZNF451Q9Y4E5 1061 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 ARNTLO00327 626 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 MRPS14O60783 128 aaKnown RBP13.28□□□□□ -0.28
SYNPO-205ENST00000522122 RENP00797 406 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 C8orf89P0DMQ9 161 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 ARSAP15289 507 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 IL12BP29460 328 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 BMP8BP34820 402 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 OPRL1P41146 370 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 STK19P49842 368 aaPredicted RBP13.28□□□□□ -0.28
SYNPO-205ENST00000522122 SLC3A1Q07837 685 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 TOR1AIP1Q5JTV8 583 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 ZNF367Q7RTV3 350 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 BMP8AQ7Z5Y6 402 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 LRRTM3Q86VH5 581 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 SPARTQ8N0X7 666 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 OR8H3Q8N146 312 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 EVA1BQ9NVM1 165 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 RBM7Q9Y580 266 aaKnown RBP13.28□□□□□ -0.28
SYNPO-205ENST00000522122 INSL6Q9Y581 213 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 HEMK1Q9Y5R4 338 aaPredicted RBP13.28□□□□□ -0.28
SYNPO-205ENST00000522122 BCAS1O75363 584 aaPredicted RBP13.28□□□□□ -0.28
SYNPO-205ENST00000522122 LEFTY1O75610 366 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 PRSS56P0CW18 603 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 DOC2AQ14183 400 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 ZSWIM9Q86XI8 627 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 FBXO15Q8NCQ5 510 aaPredicted RBP13.28□□□□□ -0.28
SYNPO-205ENST00000522122 POF1BQ8WVV4 589 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 OR5P2Q8WZ92 322 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 IRF7Q92985 503 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 MGLLQ99685 303 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 HERC2P3Q9BVR0 1158 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 CXCL16Q9H2A7 254 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 OCEL1Q9H607 264 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 KCNK6Q9Y257 313 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 CMAHPQ9Y471 501 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 WDR45Q9Y484 360 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 LY75O60449 1722 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 A0A0X1KG70 313 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 PRODHO43272 600 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 RAB36O95755 333 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 RETP07949 1114 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 ETV3P41162 512 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 BMXP51813 675 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 MAB21L1Q13394 359 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 TEAD2Q15562 447 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 OTUD1Q5VV17 481 aaPredicted RBP13.28□□□□□ -0.28
SYNPO-205ENST00000522122 SLC36A4Q6YBV0 504 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 PRR23CQ6ZRP0 262 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms