RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 HHEXQ03014 270 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 DDX39BQ13838 428 aaKnown RBP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 CYLC2Q14093 348 aaPredicted RBP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 SIM2Q14190 667 aaPredicted RBP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 SF1Q15637 639 aaKnown RBP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 HIST2H2ACQ16777 129 aaPredicted RBP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 IMPG1Q17R60 797 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 DEFB133Q30KQ1 61 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 HIST2H2AA3Q6FI13 130 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 CYP20A1Q6UW02 462 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 CYP2R1Q6VVX0 501 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 PAQR7Q86WK9 346 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 ZNF761Q86XN6 746 aaPredicted RBP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 RBM12BQ8IXT5 1001 aaKnown RBP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 KRT78Q8N1N4 520 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 KIF2BQ8N4N8 673 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 RBM15BQ8NDT2 890 aaKnown RBP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 GPR156Q8NFN8 814 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 PROKR1Q8TCW9 393 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 PIGKQ92643 395 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 CMTM5Q96DZ9 223 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 METTL2AQ96IZ6 378 aaKnown RBP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 ELF4Q99607 663 aaPredicted RBP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 BTBD10Q9BSF8 475 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 RTKNQ9BST9 563 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 DPH7Q9BTV6 452 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 SARGQ9BW04 601 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 TBC1D10AQ9BXI6 508 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 DCLRE1BQ9H816 532 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 SYNPO2LQ9H987 977 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 MRPS30Q9NP92 439 aaKnown RBP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 MRGBPQ9NV56 204 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 TMEM45AQ9NWC5 275 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 ACTR10Q9NZ32 417 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 ZIM2Q9NZV7 527 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 CCDC167Q9P0B6 97 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 SUSD2Q9UGT4 822 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 EIF3LQ9Y262 564 aaKnown RBP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 DLGAP4Q9Y2H0 992 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 KLHL20Q9Y2M5 609 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 POLR3HQ9Y535 204 aaPredicted RBP7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 KLK4Q9Y5K2 254 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 MUC3AQ02505 3323 aa7.49□□□□□ -1.21
CTHRC1-203ENST00000520337 ASCC3Q8N3C0 2202 aaKnown RBP7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 A0A1B0GTQ1 180 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 OR2A25A4D2G3 310 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 C9JVG2 144 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 HAT1O14929 419 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 OR1F1O43749 312 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 SH3BGRLO75368 114 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 SLC22A3O75751 556 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 SNRPB2P08579 225 aaKnown RBP7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 RPSAP08865 295 aaKnown RBP7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 INHBBP09529 407 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 PRKCAP17252 672 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 TYRP1P17643 537 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 SDC1P18827 310 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 POLR2CP19387 275 aaPredicted RBP7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 HRH2P25021 359 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 TACR1P25103 407 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 LAMA1P25391 3075 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 PTX3P26022 381 aaPredicted RBP7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 HOXD12P35452 270 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 BCL6P41182 706 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 STX1BP61266 288 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 PPP1CAP62136 330 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 DNAH14Q0VDD8 3507 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 MAD2L1Q13257 205 aaPredicted RBP7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 CUL3Q13618 768 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 PTGR1Q14914 329 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 RBBP5Q15291 538 aaKnown RBP7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 RPS6KA2Q15349 733 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 ANGPT1Q15389 498 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 TAF11Q15544 211 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 ZIC1Q15915 447 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 C14orf28Q4W4Y0 310 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 HLA-DQA1Q5Y7H0 255 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 FCRL6Q6DN72 434 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 NOXRED1Q6NXP6 359 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 FBXO42Q6P3S6 717 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 CEP68Q76N32 757 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 TRIM73Q86UV7 250 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 PLD3Q8IV08 490 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 LIX1Q8N485 282 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 AVL9Q8NBF6 648 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 KYQ8NBH2 561 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 OR10G6Q8NH81 332 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 WDR48Q8TAF3 677 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 CREB3L4Q8TEY5 395 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 TSPEARQ8WU66 669 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 SLC22A18Q96BI1 424 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 NAF1Q96HR8 494 aaKnown RBP7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 APOLD1Q96LR9 279 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 PPM1MQ96MI6 270 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 SERPINI1Q99574 410 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 MS4A8Q9BY19 250 aa7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 ZNF717Q9BY31 904 aaPredicted RBP7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 CADM1Q9BY67 442 aaKnown RBP7.48□□□□□ -1.21
CTHRC1-203ENST00000520337 MRPL1Q9BYD6 325 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms