RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 ADAMTS18Q8TE60 1221 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 C16orf78Q8WTQ4 265 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 MR1Q95460 341 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 TM4SF18Q96CE8 201 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 RABEP2Q9H5N1 569 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 THSD1Q9NS62 852 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 PADI1Q9ULC6 663 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 WBP11Q9Y2W2 641 aaKnown RBP16.82■□□□□ 0.28
SDC2-205ENST00000520233 SPACA6W5XKT8 324 aa16.82■□□□□ 0.28
SDC2-205ENST00000520233 TEX51A0A1B0GUA7 166 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 E9PBE3 544 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 STMND1H3BQB6 276 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 UBDO15205 165 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 KLHL41O60662 606 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 ALDOCP09972 364 aaKnown RBP16.81■□□□□ 0.28
SDC2-205ENST00000520233 RNH1P13489 461 aaKnown RBP16.81■□□□□ 0.28
SDC2-205ENST00000520233 IL10P22301 178 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 DIO3P55073 304 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 SYT16Q17RD7 645 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 METTL21CQ5VZV1 264 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 TMEM198Q66K66 360 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 LCN10Q6JVE6 187 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 COX15Q7KZN9 410 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 OVCH1Q7RTY7 1134 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 NLGN4XQ8N0W4 816 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 LIX1Q8N485 282 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 NLGN4YQ8NFZ3 816 aaPredicted RBP16.81■□□□□ 0.28
SDC2-205ENST00000520233 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.81■□□□□ 0.28
SDC2-205ENST00000520233 FKBP10Q96AY3 582 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 ZNF578Q96N58 590 aaPredicted RBP16.81■□□□□ 0.28
SDC2-205ENST00000520233 AKIRIN1Q9H9L7 192 aaPredicted RBP16.81■□□□□ 0.28
SDC2-205ENST00000520233 MYNNQ9NPC7 610 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 MKKSQ9NPJ1 570 aaPredicted RBP16.81■□□□□ 0.28
SDC2-205ENST00000520233 AIG1Q9NVV5 245 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 IFT80Q9P2H3 777 aaPredicted RBP16.81■□□□□ 0.28
SDC2-205ENST00000520233 TRPC4Q9UBN4 977 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 TRIM33Q9UPN9 1127 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 ATG4BQ9Y4P1 393 aa16.81■□□□□ 0.28
SDC2-205ENST00000520233 CNOT1A5YKK6 2376 aaKnown RBP16.8■□□□□ 0.28
SDC2-205ENST00000520233 IGLV3-12A0A075B6K2 115 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 A0A1W2PR48 441 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 PROM1O43490 865 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 RAD1O60671 282 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 ALBP02768 609 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 SPTBP11277 2137 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 G6PDP11413 515 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 IDO1P14902 403 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 CPN2P22792 545 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 TACR1P25103 407 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 BUD31P41223 144 aaPredicted RBP16.8■□□□□ 0.28
SDC2-205ENST00000520233 XCR1P46094 333 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 ASMTP46597 345 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 TAS2R50P59544 299 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 IRX1P78414 480 aaPredicted RBP16.8■□□□□ 0.28
SDC2-205ENST00000520233 SHC2P98077 582 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 GSTA3Q16772 222 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 FAM199XQ6PEV8 388 aaPredicted RBP16.8■□□□□ 0.28
SDC2-205ENST00000520233 IKBIPQ70UQ0 350 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 MED25Q71SY5 747 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 FAM9CQ8IZT9 166 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 TMEM132CQ8N3T6 1108 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 EFCAB3Q8N7B9 438 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 PEX11GQ96HA9 241 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 OR1F2PQ96R84 312 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 YIPF2Q9BWQ6 316 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 TGIF2Q9GZN2 237 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 CHST8Q9H2A9 424 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 SLC26A1Q9H2B4 701 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 ZNF282Q9UDV7 671 aaPredicted RBP16.8■□□□□ 0.28
SDC2-205ENST00000520233 BAIAP2L1Q9UHR4 511 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 GPR45Q9Y5Y3 372 aa16.8■□□□□ 0.28
SDC2-205ENST00000520233 BLACEA4D250 179 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 C9J4A7 227 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 PSMD12O00232 456 aaPredicted RBP16.79■□□□□ 0.28
SDC2-205ENST00000520233 CYR61O00622 381 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 IL3P08700 152 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 CD63P08962 238 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 TLX1P31314 330 aaPredicted RBP16.79■□□□□ 0.28
SDC2-205ENST00000520233 TNFRSF17Q02223 184 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 KLC1Q07866 573 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 HEPACAMQ14CZ8 416 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 TBC1D25Q3MII6 688 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 NDUFAF5Q5TEU4 345 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 FAM71E1Q6IPT2 247 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 MRPL14Q6P1L8 145 aaKnown RBP16.79■□□□□ 0.28
SDC2-205ENST00000520233 FAM198BQ6UWH4 519 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 CLNKQ7Z7G1 428 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 SHISA5Q8N114 240 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 TBC1D20Q96BZ9 403 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 EGLN2Q96KS0 407 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 TSSK3Q96PN8 268 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 FAIM2Q9BWQ8 316 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 BRINP2Q9C0B6 783 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 WDR41Q9HAD4 459 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 PRDM9Q9NQV7 894 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 C14orf105Q9NVL8 296 aa16.79■□□□□ 0.28
SDC2-205ENST00000520233 TEX10Q9NXF1 929 aaPredicted RBP16.79■□□□□ 0.28
SDC2-205ENST00000520233 GPN3Q9UHW5 284 aaPredicted RBP16.79■□□□□ 0.28
SDC2-205ENST00000520233 G3BP2Q9UN86 482 aaKnown RBP16.79■□□□□ 0.28
SDC2-205ENST00000520233 C1orf226A1L170 272 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms