RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ARHGEF33A8MVX0 844 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 EFCAB8A8MWE9 144 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 AHRRA9YTQ3 701 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 CASKO14936 926 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 EREGO14944 169 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 ITGA10O75578 1167 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 URI1O94763 535 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-207ENST00000520168 GLSO94925 669 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-207ENST00000520168 BPNT1O95861 308 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 IL18BPO95998 194 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 AGTP01019 485 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 TUBBP07437 444 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 FREM3P0C091 2139 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 FAM157CP0CG43 387 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 ERGP11308 486 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 HRH2P25021 359 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 PSMB5P28074 263 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 CEACAM8P31997 349 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-207ENST00000520168 RPA3P35244 121 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-207ENST00000520168 ADRA1AP35348 466 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 OPRM1P35372 400 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 BCL6P41182 706 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 SSR4P51571 173 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 CLCN2P51788 898 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 GPR85P60893 370 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 RPS15AP62244 130 aaKnown RBP4.53□□□□□ -1.68
SDCBP-207ENST00000520168 ABATP80404 500 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 MAT1AQ00266 395 aaKnown RBP4.53□□□□□ -1.68
SDCBP-207ENST00000520168 RHAGQ02094 409 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 RUNX1T1Q06455 604 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 TBL3Q12788 808 aaKnown RBP4.53□□□□□ -1.68
SDCBP-207ENST00000520168 SPA17Q15506 151 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 GRAMD1BQ3KR37 738 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 BBS9Q3SYG4 887 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 ZNF425Q6IV72 752 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 NXPE4Q6UWF7 544 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 QSOX2Q6ZRP7 698 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 RFX6Q8HWS3 928 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 ZNF567Q8N184 647 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 CEP112Q8N8E3 955 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 GOLM1Q8NBJ4 401 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 PPHLN1Q8NEY8 458 aaKnown RBP4.53□□□□□ -1.68
SDCBP-207ENST00000520168 OR2M7Q8NG81 312 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 OR9A4Q8NGU2 314 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 CFAP61Q8NHU2 1237 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 STYXQ8WUJ0 223 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 RAPGEF5Q92565 580 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 P3H4Q92791 437 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 SLCO2A1Q92959 643 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 HSPBAP1Q96EW2 488 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 PERPQ96FX8 193 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 CDKN2AIPNLQ96HQ2 116 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 DNAJC1Q96KC8 554 aaKnown RBP4.53□□□□□ -1.68
SDCBP-207ENST00000520168 CCDC42Q96M95 316 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 IL17FQ96PD4 163 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 PANX3Q96QZ0 392 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 FAM173AQ9BQD7 235 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 CARD6Q9BX69 1037 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 LDAHQ9H6V9 325 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 NHEJ1Q9H9Q4 299 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-207ENST00000520168 PPCSQ9HAB8 311 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 IL1RL2Q9HB29 575 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 ARNT2Q9HBZ2 717 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 ANKHQ9HCJ1 492 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 HPF1Q9NWY4 346 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 C6orf203Q9P0P8 240 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-207ENST00000520168 STOX2Q9P2F5 926 aaPredicted RBP4.53□□□□□ -1.68
SDCBP-207ENST00000520168 NDRG3Q9UGV2 375 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 CDC42EP3Q9UKI2 254 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 GTF2A1LQ9UNN4 478 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 RABL2BQ9UNT1 228 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 YARS2Q9Y2Z4 477 aaKnown RBP4.53□□□□□ -1.68
SDCBP-207ENST00000520168 NFS1Q9Y697 457 aa4.53□□□□□ -1.68
SDCBP-207ENST00000520168 TGP01266 2768 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 KCNE1BA0A087WTH5 132 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 TRGV5A0A0B4J1U4 118 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 A0A1W2PPV9 198 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 SH3D21A4FU49 640 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 MBD3L4A6NDZ8 208 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 MBD3L5A6NJ08 208 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 FAM166BA8MTA8 275 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 H0YHG0 523 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 CD5LO43866 347 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 ERN1O75460 977 aaKnown RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 C1orf105O95561 183 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 EPPINO95925 133 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 STATHP02808 62 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 SERPING1P05155 500 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 F13BP05160 661 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 FHP07954 510 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 H2AFZP0C0S5 128 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 JUNBP17275 347 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 STIP1P31948 543 aaKnown RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 CCR7P32248 378 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 MAGEA5P43359 124 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 PTH2RP49190 550 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 PCYT1AP49585 367 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 CDKN1CP49918 316 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 CSE1LP55060 971 aaKnown RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 TAS2R40P59535 323 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms