RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 NAT14Q8WUY8 206 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SLC13A3Q8WWT9 602 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 RSC1A1Q92681 617 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SLCO2A1Q92959 643 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.66□□□□□ -1.98
SKP1-204ENST00000517691 SPSB4Q96A44 273 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 ULK4Q96C45 1275 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SGF29Q96ES7 293 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SAT2Q96F10 170 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 SNF8Q96H20 258 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CDKN2AIPNLQ96HQ2 116 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 COX14Q96I36 57 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 ZNF778Q96MU6 729 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 DGAT2Q96PD7 388 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 OR2M4Q96R27 311 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 RUFY1Q96T51 708 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 COPS8Q99627 209 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 LRRC1Q9BTT6 524 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 LRRC61Q9BV99 259 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 GSDMCQ9BYG8 508 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 FRMD8Q9BZ67 464 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 IL22Q9GZX6 179 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CLPBQ9H078 707 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SYNDIG1Q9H7V2 258 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 COQ10BQ9H8M1 238 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 PPANQ9NQ55 473 aaKnown RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 PFDN4Q9NQP4 134 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 KLC4Q9NSK0 619 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SYBUQ9NX95 663 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 P4HTMQ9NXG6 502 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 UBAP1Q9NZ09 502 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 NLGN3Q9NZ94 848 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 MARCH4Q9P2E8 410 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 RIMKLBQ9ULI2 386 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 KCNK6Q9Y257 313 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 NAALAD2Q9Y3Q0 740 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 NEU2Q9Y3R4 380 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 TCAF1Q9Y4C2 921 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 PLEKHM1Q9Y4G2 1056 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CSNK1G3Q9Y6M4 447 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 RIF1Q5UIP0 2472 aaKnown RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 CKAP5Q14008 2032 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 NUP205Q92621 2012 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 PTPRZ1P23471 2315 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 PIEZO1Q92508 2521 aa2.65□□□□□ -1.98
SKP1-204ENST00000517691 A0A087WWL8 130 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 A0A1W2PR48 441 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 PDZK1P1A8MUH7 402 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 GAPDHSO14556 408 aaPredicted RBP2.65□□□□□ -1.99
SKP1-204ENST00000517691 PFDN6O15212 129 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 CD3EAPO15446 510 aaKnown RBP2.65□□□□□ -1.99
SKP1-204ENST00000517691 NUAK1O60285 661 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 NDUFS3O75489 264 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 BANF1O75531 89 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 POP7O75817 140 aaKnown RBP2.65□□□□□ -1.99
SKP1-204ENST00000517691 UNC5CO95185 931 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 DDAH2O95865 285 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 ATP1B2P14415 290 aaPredicted RBP2.65□□□□□ -1.99
SKP1-204ENST00000517691 ZNF7P17097 686 aaPredicted RBP2.65□□□□□ -1.99
SKP1-204ENST00000517691 CKMT2P17540 419 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 ITGB6P18564 788 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 CSRP1P21291 193 aaKnown RBP2.65□□□□□ -1.99
SKP1-204ENST00000517691 FPR1P21462 350 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 IDSP22304 550 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 ACRV1P26436 265 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 ACVR2AP27037 513 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 TTKP33981 857 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 CA5AP35218 305 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 MAGEA6P43360 314 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 RPL21P46778 160 aaKnown RBP2.65□□□□□ -1.99
SKP1-204ENST00000517691 GLRBP48167 497 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 PIK3CGP48736 1102 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 DUSP3P51452 185 aaPredicted RBP2.65□□□□□ -1.99
SKP1-204ENST00000517691 PLTPP55058 493 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 UFM1P61960 85 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 GUCY2DQ02846 1103 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 CD69Q07108 199 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 NFATC3Q12968 1075 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 DNAJC3Q13217 504 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 THOC5Q13769 683 aaKnown RBP2.65□□□□□ -1.99
SKP1-204ENST00000517691 BOP1Q14137 746 aaKnown RBP2.65□□□□□ -1.99
SKP1-204ENST00000517691 KRT33BQ14525 404 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 SLC29A2Q14542 456 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 CRYMQ14894 314 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 CLCA4Q14CN2 919 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 INAQ16352 499 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 GPR33Q49SQ1 333 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 KCTD21Q4G0X4 260 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 LYPLAL1Q5VWZ2 237 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 SHEQ5VZ18 495 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 VASNQ6EMK4 673 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 PTRHD1Q6GMV3 140 aaKnown RBP2.65□□□□□ -1.99
SKP1-204ENST00000517691 MRNIPQ6NTE8 343 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 AFTPHQ6ULP2 937 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 CD300LDQ6UXZ3 194 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 LDB1Q86U70 411 aaPredicted RBP2.65□□□□□ -1.99
SKP1-204ENST00000517691 AMZ2Q86W34 360 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 CCDC25Q86WR0 208 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 NRROSQ86YC3 692 aa2.65□□□□□ -1.99
SKP1-204ENST00000517691 KLHDC8BQ8IXV7 354 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms