RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 MGAT5Q09328 741 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 AP1B1Q10567 949 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 WASHC5Q12768 1159 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 BNIP1Q12981 228 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 MPP3Q13368 585 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 RUNX2Q13950 521 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 PRPSAP1Q14558 356 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 NAA25Q14CX7 972 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 OASLQ15646 514 aaKnown RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 RBBP7Q16576 425 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 MAPKAPK3Q16644 382 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 KCTD19Q17RG1 926 aaPredicted RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 PARP6Q2NL67 630 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 P3H1Q32P28 736 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 ARMC12Q5T9G4 340 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 SEL1L2Q5TEA6 688 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 CCDC181Q5TID7 509 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 C1orf189Q5VU69 101 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 ZDHHC20Q5W0Z9 365 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 DUPD1Q68J44 220 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 ITPRIPL1Q6GPH6 555 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 SLC25A25Q6KCM7 469 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 C1orf229Q6ZS94 237 aaPredicted RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 KIAA0408Q6ZU52 694 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 TRPM8Q7Z2W7 1104 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 GLCCI1Q86VQ1 547 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 CPNE8Q86YQ8 564 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 CDKL3Q8IVW4 592 aaPredicted RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 KLHL7Q8IXQ5 586 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 PELI3Q8N2H9 469 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 CNTD1Q8N815 330 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 CCDC63Q8NA47 563 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 POGLUT1Q8NBL1 392 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 SLC35B2Q8TB61 432 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 ARRDC2Q8TBH0 407 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 ACTL9Q8TC94 416 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 CCHCR1Q8TD31 782 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 KCTD4Q8WVF5 259 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 TSEN15Q8WW01 171 aaKnown RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 IFT81Q8WYA0 676 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 FBXW5Q969U6 566 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 CHMP6Q96FZ7 201 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 PGM2Q96G03 612 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 ADAD1Q96M93 576 aaKnown RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 KLHL32Q96NJ5 620 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 RUNDC3BQ96NL0 473 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 QKIQ96PU8 341 aaKnown RBP eCLIP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 FCRL5Q96RD9 977 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 SMC6Q96SB8 1091 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 TRAF4Q9BUZ4 470 aaPredicted RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 CNPPD1Q9BV87 410 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 HEMGNQ9BXL5 484 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 TDRD1Q9BXT4 1180 aaKnown RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 ALOXE3Q9BYJ1 711 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 DDX47Q9H0S4 455 aaKnown RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 GOLPH3Q9H4A6 298 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 ALG2Q9H553 416 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 WDR26Q9H7D7 661 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 CNOT10Q9H9A5 744 aaKnown RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 ARNT2Q9HBZ2 717 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 GLOD4Q9HC38 313 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 MAGEE1Q9HCI5 957 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 MMP25Q9NPA2 562 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 RAD18Q9NS91 495 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 GRHL1Q9NZI5 618 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 UBP1Q9NZI7 540 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 NOP53Q9NZM5 478 aaKnown RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 HACD3Q9P035 362 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 NFKBIL1Q9UBC1 381 aaPredicted RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 TBC1D29Q9UFV1 150 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 FCF1Q9Y324 198 aaKnown RBP2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 HEY1Q9Y5J3 304 aa2.89□□□□□ -1.95
SCARNA13-201ENST00000516672 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 KIR2DS5A0A0G2JLQ3 304 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 A0A0G2JNG1 304 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 A0A0J9YYE9 177 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 MAGEB16A2A368 324 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 DPPA5A6NC42 116 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 OR14I1A6ND48 311 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 ANKRD66B4E2M5 251 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 GPR89AB7ZAQ6 455 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 TMEM150CB9EJG8 249 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 H7C0C1 242 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 KIR2DS3K7RE56 304 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 KCNK1O00180 336 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 SMAPO00193 183 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PGRMC1O00264 195 aaKnown RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 NDC80O14777 642 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 SNX3O60493 162 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 NEURL1O76050 574 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 NDST3O95803 873 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PRLP01236 227 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 CD8AP01732 235 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 TRBC1P01850 177 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 FGGP02679 453 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 IFNW1P05000 195 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 UGT2B4P06133 528 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 MMP2P08253 660 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 VIMP08670 466 aaKnown RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 RPSAP08865 295 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms