RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 ZNF146Q15072 292 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 OR4C11Q6IEV9 310 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 PET117Q6UWS5 81 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 ANKRD33Q7Z3H0 272 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 GPR141Q7Z602 305 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 CEACAM19Q7Z692 300 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 PRUNE1Q86TP1 453 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 KRTAP11-1Q8IUC1 163 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 CROCCP3Q8IVE0 287 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 Q8NFD4 153 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 NCOA7Q8NI08 942 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 RPF1Q9H9Y2 349 aaKnown RBP3.01□□□□□ -1.93
LINC01088-211ENST00000515597 ABCB10Q9NRK6 738 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 IARS2Q9NSE4 1012 aaKnown RBP3.01□□□□□ -1.93
LINC01088-211ENST00000515597 PDRG1Q9NUG6 133 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 POLKQ9UBT6 870 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 GIMAP2Q9UG22 337 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 NRBP1Q9UHY1 535 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 AGTPBP1Q9UPW5 1226 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 STYXL1Q9Y6J8 313 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 GON4LQ3T8J9 2241 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 PXDNQ92626 1479 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 TMEM131LA2VDJ0 1609 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 CEP152O94986 1710 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 WDR90Q96KV7 1748 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 NPIPA3F8WFD2 350 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 RNF103O00237 685 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 TNRC18O15417 2968 aaPredicted RBP3□□□□□ -1.93
LINC01088-211ENST00000515597 PPIP5K2O43314 1243 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 ECE2O60344 883 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 PRAF2O60831 178 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 FCGR3BO75015 233 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 MOCS2O96007 188 aaPredicted RBP3□□□□□ -1.93
LINC01088-211ENST00000515597 MELTFP08582 738 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 SCG2P13521 617 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 SELEP16581 610 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 AOC1P19801 751 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 SSTR1P30872 391 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 OR3A3P47888 321 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 NDST2P52849 883 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 FKBP3Q00688 224 aaKnown RBP3□□□□□ -1.93
LINC01088-211ENST00000515597 TSPY1Q01534 308 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 SCN1BQ07699 218 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 TAZQ16635 292 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 DUSP5Q16690 384 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 EIPR1Q53HC9 387 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 TXNRD3NBQ6F5E7 133 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 FAM166AQ6J272 317 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 SPATA19Q7Z5L4 167 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 PIGWQ7Z7B1 504 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 SLC22A15Q8IZD6 547 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 SLC34A3Q8N130 599 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 NME8Q8N427 588 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 CCDC185Q8N715 623 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 SUMF1Q8NBK3 374 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 ZDHHC19Q8WVZ1 309 aaPredicted RBP3□□□□□ -1.93
LINC01088-211ENST00000515597 CASP10Q92851 521 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 FAM162AQ96A26 154 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 NXPE2Q96DL1 559 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 ERO1AQ96HE7 468 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 RBM41Q96IZ5 413 aaKnown RBP3□□□□□ -1.93
LINC01088-211ENST00000515597 SPATA17Q96L03 361 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 C10orf88Q9H8K7 445 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 NLGN3Q9NZ94 848 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 THSD7AQ9UPZ6 1657 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 PLEKHG1Q9ULL1 1385 aa3□□□□□ -1.93
LINC01088-211ENST00000515597 GOLGB1Q14789 3259 aaKnown RBP2.99□□□□□ -1.93
LINC01088-211ENST00000515597 ADGRB3O60242 1522 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 TRPM2O94759 1503 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 A0A087WZ39 114 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 hCG_38984A0A1B0GV85 526 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 E5RGE8 158 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 FAM86B1E9PN63 330 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 LRCH4O75427 683 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 SAP30O75446 220 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 SIX3O95343 332 aaPredicted RBP2.99□□□□□ -1.93
LINC01088-211ENST00000515597 HPP00738 406 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 FAM86B2P0C5J1 330 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 FAM58BPP0C7Q3 252 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 PCP11498 1178 aaKnown RBP2.99□□□□□ -1.93
LINC01088-211ENST00000515597 SOAT1P35610 550 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 PRKCIP41743 596 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 GMPSP49915 693 aaPredicted RBP2.99□□□□□ -1.93
LINC01088-211ENST00000515597 KRTAP10-1P60331 282 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 ERVK-16P61578 105 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 PPA1Q15181 289 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 ALDH1L2Q3SY69 923 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 FAM106AQ4KMX7 169 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 LBHQ53QV2 105 aaPredicted RBP2.99□□□□□ -1.93
LINC01088-211ENST00000515597 TRAT1Q6PIZ9 186 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 TIPARPQ7Z3E1 657 aaKnown RBP2.99□□□□□ -1.93
LINC01088-211ENST00000515597 VSIG1Q86XK7 387 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 RNF130Q86XS8 419 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 APCDD1Q8J025 514 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 FGFRL1Q8N441 504 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 ST6GALNAC6Q969X2 333 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 NEDD4LQ96PU5 975 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 ALKBH7Q9BT30 221 aaPredicted RBP2.99□□□□□ -1.93
LINC01088-211ENST00000515597 ADNPQ9H2P0 1102 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 UBQLN3Q9H347 655 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms