RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ABCG4Q9H172 646 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 SEMA6AQ9H2E6 1030 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 TCEAL2Q9H3H9 227 aaPredicted RBP7.96□□□□□ -1.14
RNF4-220ENST00000513578 PIF1Q9H611 641 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 NTN4Q9HB63 628 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 NEUROD4Q9HD90 331 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 PRM3Q9NNZ6 103 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 C1GALT1Q9NS00 363 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 LYARQ9NX58 379 aaKnown RBP7.96□□□□□ -1.14
RNF4-220ENST00000513578 ZSCAN32Q9NX65 697 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 ACTR10Q9NZ32 417 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 RPS6KA6Q9UK32 745 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 ASB4Q9Y574 426 aa7.96□□□□□ -1.14
RNF4-220ENST00000513578 THADAQ6YHU6 1953 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 A0A0J9YY10 115 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 C7orf72A4D263 438 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 URADA6NGE7 173 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 MYO1GB0I1T2 1018 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 TLR4O00206 839 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 UPK1AO00322 258 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 RTCAO00442 366 aaKnown RBP7.95□□□□□ -1.14
RNF4-220ENST00000513578 SCAMP1O15126 338 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 PDPK1O15530 556 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 PRKD3O94806 890 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 HPRP00739 348 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 SERPINA1P01009 418 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 GBAP04062 536 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 WNT1P04628 370 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 FAM58BPP0C7Q3 252 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 JUNDP17535 347 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 SSR2P43308 183 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 RXRGP48443 463 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 EEF1A2Q05639 463 aaKnown RBP7.95□□□□□ -1.14
RNF4-220ENST00000513578 PLCL1Q15111 1095 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 ZNF630Q2M218 657 aaPredicted RBP7.95□□□□□ -1.14
RNF4-220ENST00000513578 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.95□□□□□ -1.14
RNF4-220ENST00000513578 TOR1AIP1Q5JTV8 583 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 SAXO2Q658L1 398 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 OGFOD3Q6PK18 319 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 FIGLAQ6QHK4 219 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 SPESP1Q6UW49 350 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 TMEM64Q6YI46 380 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 ZNF793Q6ZN11 406 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 RNF44Q7L0R7 432 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 PIWIL3Q7Z3Z3 882 aaKnown RBP7.95□□□□□ -1.14
RNF4-220ENST00000513578 TAF8Q7Z7C8 310 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 GKN2Q86XP6 184 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 EPHX4Q8IUS5 362 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 PLD3Q8IV08 490 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 APLFQ8IW19 511 aaPredicted RBP7.95□□□□□ -1.14
RNF4-220ENST00000513578 SIX5Q8N196 739 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 SVOPLQ8N434 492 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 METTL25Q8N6Q8 603 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 FRMD1Q8N878 549 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 ACOT4Q8N9L9 421 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 CAMKVQ8NCB2 501 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 C11orf65Q8NCR3 313 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 BAHD1Q8TBE0 780 aaPredicted RBP7.95□□□□□ -1.14
RNF4-220ENST00000513578 FAM110BQ8TC76 370 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 ZDHHC1Q8WTX9 485 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 RLN3Q8WXF3 142 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 CIDECQ96AQ7 238 aaPredicted RBP7.95□□□□□ -1.14
RNF4-220ENST00000513578 NEURL3Q96EH8 262 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 ZBED6CLQ96FA7 236 aaPredicted RBP7.95□□□□□ -1.14
RNF4-220ENST00000513578 SLC47A1Q96FL8 570 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 SPACA7Q96KW9 195 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 RDH12Q96NR8 316 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 SEPHS2Q99611 448 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 SLC29A1Q99808 456 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 C17orf62Q9BQA9 187 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 DPH2Q9BQC3 489 aaPredicted RBP7.95□□□□□ -1.14
RNF4-220ENST00000513578 SLC35A5Q9BS91 424 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 LRRC61Q9BV99 259 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 NLNQ9BYT8 704 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 TPSD1Q9BZJ3 242 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 DUSP15Q9H1R2 295 aaPredicted RBP7.95□□□□□ -1.14
RNF4-220ENST00000513578 KLHL31Q9H511 634 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 TBC1D17Q9HA65 648 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 GPATCH2Q9NW75 528 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 THUMPD1Q9NXG2 353 aaKnown RBP7.95□□□□□ -1.14
RNF4-220ENST00000513578 APOBEC3BQ9UH17 382 aaKnown RBP7.95□□□□□ -1.14
RNF4-220ENST00000513578 ZNF451Q9Y4E5 1061 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 AP4B1Q9Y6B7 739 aa7.95□□□□□ -1.14
RNF4-220ENST00000513578 OR6C74A6NCV1 312 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 OR5K3A6NET4 321 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 LILRA5A6NI73 299 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 K7ESF4 209 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 SOCS2O14508 198 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 AXIN1O15169 862 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 MAP3K13O43283 966 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 ERI3O43414 337 aaKnown RBP7.94□□□□□ -1.14
RNF4-220ENST00000513578 PROM1O43490 865 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 LYNP07948 512 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 IFI6P09912 130 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 SLC35G6P0C7Q6 338 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 ARAFP10398 606 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 CKMT2P17540 419 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 CXCL12P48061 93 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 NXPH1P58417 271 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 SLAMF1Q13291 335 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms