RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 RAD51AP1Q96B01 352 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 COQ10AQ96MF6 247 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 NELL2Q99435 816 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 BTBD1Q9H0C5 482 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 IL23AQ9NPF7 189 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 MTMR10Q9NXD2 777 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 PCDHA9Q9Y5H5 950 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 A3GALT2U3KPV4 340 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 RIIAD1A6NNX1 92 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 HAS3O00219 553 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 ARNTLO00327 626 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 PDCD5O14737 125 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 PCDH7O60245 1069 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 H2AFB2P0C5Z0 115 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 KCNA5P22460 613 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 DDOSTP39656 456 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 GDI2P50395 445 aaKnown RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 PCDH1Q08174 1060 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 CDC20Q12834 499 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 CAMK1Q14012 370 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 CCDC58Q4VC31 144 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 STX12Q86Y82 276 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 TMEM151AQ8N4L1 468 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 FAM98AQ8NCA5 519 aaKnown RBP10.83□□□□□ -0.68
TCOF1-211ENST00000513346 PSD4Q8NDX1 1056 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 GPR151Q8TDV0 419 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 WFIKKN2Q8TEU8 576 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 SLC22A17Q8WUG5 538 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 KCNJ9Q92806 393 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 KAT2AQ92830 837 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 PEX13Q92968 403 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 MARK1Q9P0L2 795 aa10.83□□□□□ -0.68
TCOF1-211ENST00000513346 LRRN3E7EW58 273 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 BMP1P13497 986 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 CELP19835 753 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 CDH11P55287 796 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 FOXA1P55317 472 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 SELENBP1Q13228 472 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 DSG2Q14126 1118 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 PTPRCAPQ14761 206 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 POU4F3Q15319 338 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 TATDN3Q17R31 274 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 SYT6Q5T7P8 510 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-211ENST00000513346 LRRC70Q7Z2Q7 622 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 VTCN1Q7Z7D3 282 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 NPAS3Q8IXF0 933 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 GPR135Q8IZ08 494 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 HAVCR1Q96D42 359 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 ZNF285Q96NJ3 590 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 IL12RB2Q99665 862 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 PTPN18Q99952 460 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 CD244Q9BZW8 370 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 ABCG4Q9H172 646 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 LRRN3Q9H3W5 708 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 C3orf14Q9HBI5 128 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 BRD7Q9NPI1 651 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 HPF1Q9NWY4 346 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 SLC39A1Q9NY26 324 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 POLR1DQ9Y2S0 133 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 FKBP7Q9Y680 259 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 BTAF1O14981 1849 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 TRIOBPQ9H2D6 2365 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 PCDH17O14917 1159 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 PRKYO43930 277 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 ARHGEF15O94989 841 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 PDGFAP04085 211 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 KCNC4Q03721 635 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 BIKQ13323 160 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 ABRAXAS2Q15018 415 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 LRIT3Q3SXY7 679 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 VASH1Q7L8A9 365 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-211ENST00000513346 SERINC5Q86VE9 423 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 PDZD9Q8IXQ8 264 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 FAM217AQ8IXS0 508 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 FTMTQ8N4E7 242 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 PYCR2Q96C36 320 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 ZSWIM3Q96MP5 696 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 CACNG6Q9BXT2 260 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 TREM1Q9NP99 234 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 VAPAQ9P0L0 249 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 MARCH4Q9P2E8 410 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-211ENST00000513346 ALG5Q9Y673 324 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 ZNF195O14628 629 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 RASGRP1O95267 797 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 PAHP00439 452 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 C21orf33P30042 268 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-211ENST00000513346 MAT2AP31153 395 aaKnown RBP10.82□□□□□ -0.68
TCOF1-211ENST00000513346 CD68P34810 354 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-211ENST00000513346 NSG1P42857 185 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 SEMG2Q02383 582 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 FAM214AQ32MH5 1076 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 C4orf46Q504U0 113 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 CDKL4Q5MAI5 379 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 ZNF648Q5T619 568 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-211ENST00000513346 BCL2L15Q5TBC7 163 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 RAB12Q6IQ22 244 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 GALNT7Q86SF2 657 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 CAMK1GQ96NX5 476 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 CCM2Q9BSQ5 444 aa10.82□□□□□ -0.68
TCOF1-211ENST00000513346 PGAP2Q9UHJ9 254 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms