RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 C9P02748 559 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 GBAP04062 536 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 EPCAMP16422 314 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 ANOS1P23352 680 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 MPZP25189 248 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 ITGA3P26006 1051 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 CHRNB4P30926 498 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 HOXC13P31276 330 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 YWHABP31946 246 aaKnown RBP3.83□□□□□ -1.8
HTT-210ENST00000512909 TNNT3P45378 269 aaPredicted RBP3.83□□□□□ -1.8
HTT-210ENST00000512909 KRTAP10-11P60412 298 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 LAMTOR4Q0VGL1 99 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 DRP2Q13474 957 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 TFDP1Q14186 410 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 RBBP7Q16576 425 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 CA9Q16790 459 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 FGD3Q5JSP0 725 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 FAM91A1Q658Y4 838 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 C11orf88Q6PI97 169 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 RPAINQ86UA6 219 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 FAM228AQ86W67 206 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 RAB42Q8N4Z0 105 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 RNF149Q8NC42 400 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 GOT1L1Q8NHS2 421 aaPredicted RBP3.83□□□□□ -1.8
HTT-210ENST00000512909 C9orf43Q8TAL5 461 aaPredicted RBP3.83□□□□□ -1.8
HTT-210ENST00000512909 FGFBP3Q8TAT2 258 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 UBLCP1Q8WVY7 318 aaPredicted RBP3.83□□□□□ -1.8
HTT-210ENST00000512909 METTL21AQ8WXB1 218 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 CRYGNQ8WXF5 182 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 EXOC4Q96A65 974 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 CPB2Q96IY4 423 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 FAM71F1Q96KD3 344 aaPredicted RBP3.83□□□□□ -1.8
HTT-210ENST00000512909 IFT74Q96LB3 600 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 LRRC3BQ96PB8 259 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 LXNQ9BS40 222 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 TCHPQ9BT92 498 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 RAB34Q9BZG1 259 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 TRIM6Q9C030 488 aaPredicted RBP3.83□□□□□ -1.8
HTT-210ENST00000512909 ARRDC1-AS1Q9H2J1 176 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 TLE6Q9H808 572 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 PELI2Q9HAT8 420 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 Q9N2K0 584 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 P4HTMQ9NXG6 502 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 PKD2L2Q9NZM6 624 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.83□□□□□ -1.8
HTT-210ENST00000512909 ARMCX3Q9UH62 379 aaPredicted RBP3.83□□□□□ -1.8
HTT-210ENST00000512909 PIN4Q9Y237 131 aaKnown RBP3.83□□□□□ -1.8
HTT-210ENST00000512909 STK36Q9NRP7 1315 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 COL1A2P08123 1366 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 DOCK7Q96N67 2140 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 PARP14Q460N5 1801 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 IGSF9BQ9UPX0 1349 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 IGLV9-49A0A0B4J1Y8 123 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 TRAV24A0A0B4J272 114 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 A0A1W2PPM1 405 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 IFITM10A6NMD0 228 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 KLF11O14901 512 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 TRMUO75648 421 aaKnown RBP3.82□□□□□ -1.8
HTT-210ENST00000512909 RLN1P04808 185 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 SPP1P10451 314 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 DARSP14868 501 aaKnown RBP3.82□□□□□ -1.8
HTT-210ENST00000512909 CA4P22748 312 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 HOXC8P31273 242 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 SFTPDP35247 375 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 PTGER4P35408 488 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 GPC3P51654 580 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 MAZP56270 477 aaKnown RBP3.82□□□□□ -1.8
HTT-210ENST00000512909 MTCP1P56278 107 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 HNRNPKP61978 463 aaKnown RBP eCLIP3.82□□□□□ -1.8
HTT-210ENST00000512909 MYL7Q01449 175 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 ZNF415Q09FC8 603 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 PPP2R5CQ13362 524 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 MXD4Q14582 209 aaPredicted RBP3.82□□□□□ -1.8
HTT-210ENST00000512909 EMC2Q15006 297 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 NPTX1Q15818 432 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 UGP2Q16851 508 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 KIAA1644Q3SXP7 199 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 UGT3A2Q3SY77 523 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 ZC2HC1CQ53FD0 456 aaPredicted RBP3.82□□□□□ -1.8
HTT-210ENST00000512909 ODF2Q5BJF6 829 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 TCEAL5Q5H9L2 206 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 C6orf136Q5SQH8 315 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 PLPP4Q5VZY2 271 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 OR4A47Q6IF82 309 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 SPATA19Q7Z5L4 167 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 NRARPQ7Z6K4 114 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 ABI3BPQ7Z7G0 1075 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 CDR2LQ86X02 465 aaPredicted RBP3.82□□□□□ -1.8
HTT-210ENST00000512909 CATSPER3Q86XQ3 398 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 ECHDC2Q86YB7 292 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 CROCCP3Q8IVE0 287 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 MMD2Q8IY49 270 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 RASGEF1AQ8N9B8 481 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 COLGALT1Q8NBJ5 622 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 Q8NFD4 153 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 URGCPQ8TCY9 931 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.82□□□□□ -1.8
HTT-210ENST00000512909 NSMAFQ92636 917 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 MRPL38Q96DV4 380 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms