RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SLC22A16Q86VW1 577 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 DMRTC2Q8IXT2 367 aaPredicted RBP11.7□□□□□ -0.54
VEGFA-216ENST00000512683 CLYBLQ8N0X4 340 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 C17orf53Q8N3J3 647 aaPredicted RBP11.7□□□□□ -0.54
VEGFA-216ENST00000512683 TCAIMQ8N3R3 496 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 MORN4Q8NDC4 146 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 SRFBP1Q8NEF9 429 aaKnown RBP11.7□□□□□ -0.54
VEGFA-216ENST00000512683 MS4A6EQ96DS6 147 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 SERINC2Q96SA4 455 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 ROGDIQ9GZN7 287 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 DPH5Q9H2P9 285 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 RHOJQ9H4E5 214 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 ZDHHC11Q9H8X9 412 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 POPDC3Q9HBV1 291 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 HPF1Q9NWY4 346 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 NSMCE4AQ9NXX6 385 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 WHRNQ9P202 907 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 TNFRSF10DQ9UBN6 386 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 VTI1BQ9UEU0 232 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 ERVK-11Q9UQG0 969 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 OARD1Q9Y530 152 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.7□□□□□ -0.54
VEGFA-216ENST00000512683 CLCA3PQ9Y6N3 262 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 SETD2Q9BYW2 2564 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-216ENST00000512683 NPEPPSL1A6NEC2 478 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 FAM187AA6NFU0 413 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 A8MUA0 341 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 BCKDKO14874 412 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 TOXO94900 526 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 CNR1P21554 472 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 GGT5P36269 586 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 HNF4AP41235 474 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 PPIAP62937 165 aaKnown RBP11.69□□□□□ -0.54
VEGFA-216ENST00000512683 C2orf54Q08AI8 447 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 SLC13A2Q13183 592 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 RUNX2Q13950 521 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 SERTAD2Q14140 314 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 HYAL4Q2M3T9 481 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 TOR1AIP1Q5JTV8 583 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 GK5Q6ZS86 529 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 CAPN12Q6ZSI9 719 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 CEP128Q6ZU80 1094 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 MDGA2Q7Z553 956 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 TMPRSS11BQ86T26 416 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 GOLM1Q8NBJ4 401 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 BBOF1Q8ND07 529 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 PSD4Q8NDX1 1056 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 OR2L5Q8NG80 312 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 PYROXD1Q8WU10 500 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 TSNARE1Q96NA8 513 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 RHBGQ9H310 441 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 CNOT10Q9H9A5 744 aaKnown RBP11.69□□□□□ -0.54
VEGFA-216ENST00000512683 PNO1Q9NRX1 252 aaKnown RBP11.69□□□□□ -0.54
VEGFA-216ENST00000512683 RNF6Q9Y252 685 aa11.69□□□□□ -0.54
VEGFA-216ENST00000512683 MTO1Q9Y2Z2 717 aaKnown RBP11.69□□□□□ -0.54
VEGFA-216ENST00000512683 A0A1B0GVC2 190 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 ANKDD1BA6NHY2 528 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 CDC40O60508 579 aaKnown RBP eCLIP11.68□□□□□ -0.54
VEGFA-216ENST00000512683 B3GALT4O96024 378 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 IGHG3P01860 377 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 MSX1P28360 303 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 SLC6A12P48065 614 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 ST13P50502 369 aaKnown RBP11.68□□□□□ -0.54
VEGFA-216ENST00000512683 MTTPP55157 894 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 KRTAP10-9P60411 292 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 ETF1P62495 437 aaKnown RBP11.68□□□□□ -0.54
VEGFA-216ENST00000512683 TFF3Q07654 80 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 LAPTM5Q13571 262 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 BMPR2Q13873 1038 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 TRADDQ15628 312 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 C18orf21Q32NC0 220 aaPredicted RBP11.68□□□□□ -0.54
VEGFA-216ENST00000512683 GXYLT1Q4G148 440 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 TRIM40Q6P9F5 258 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 OPN5Q6U736 354 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 C3P1Q6ZMU1 363 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 RTL4Q6ZR62 310 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 CYS1Q717R9 158 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 MAATS1Q7Z4T9 603 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 OR52N2Q8NGI0 321 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 OR14A16Q8NHC5 309 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 ASB15Q8WXK1 588 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 NCLNQ969V3 563 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 RHBDF1Q96CC6 855 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 QRFPRQ96P65 431 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 EGFL8Q99944 293 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 FAM173AQ9BQD7 235 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 REXO4Q9GZR2 422 aaKnown RBP11.68□□□□□ -0.54
VEGFA-216ENST00000512683 CAB39LQ9H9S4 337 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 IL1RL2Q9HB29 575 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 LYRM4Q9HD34 91 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 SAYSD1Q9NPB0 183 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 CTNNAL1Q9UBT7 734 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 DAPP1Q9UN19 280 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 EDARQ9UNE0 448 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 PCDHGB3Q9Y5G1 929 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 CLDN16Q9Y5I7 305 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 HRH3Q9Y5N1 445 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 TACC2O95359 2948 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 CSMD2Q7Z408 3487 aa11.68□□□□□ -0.54
VEGFA-216ENST00000512683 TCRBV9S1A1TA0A576 114 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms