RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 QRFPRQ96P65 431 aa13.6□□□□□ -0.23
AP003555.1-202ENST00000511013 PELI2Q9HAT8 420 aa13.6□□□□□ -0.23
AP003555.1-202ENST00000511013 RLIMQ9NVW2 624 aa13.6□□□□□ -0.23
AP003555.1-202ENST00000511013 SPATA7Q9P0W8 599 aa13.6□□□□□ -0.23
AP003555.1-202ENST00000511013 ACSL6Q9UKU0 697 aa13.6□□□□□ -0.23
AP003555.1-202ENST00000511013 RAB23Q9ULC3 237 aa13.6□□□□□ -0.23
AP003555.1-202ENST00000511013 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.6□□□□□ -0.23
AP003555.1-202ENST00000511013 TRIM43BA6NCK2 446 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 ANKDD1BA6NHY2 528 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 C5orf58C9J3I9 102 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 K7ESM1 405 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 M0R082 166 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 TAF4O00268 1085 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 KIAA0355O15063 1070 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 CNOT3O75175 753 aaKnown RBP13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 RPLP0P05388 317 aaKnown RBP13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 GABRB1P18505 474 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 LIPAP38571 399 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 GSSP48637 474 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 NTHL1P78549 312 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 SFSWAPQ12872 951 aaKnown RBP13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 ARHGAP19Q14CB8 494 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 SYT16Q17RD7 645 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 TOR1AIP1Q5JTV8 583 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 PERM1Q5SV97 790 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 BTLAQ7Z6A9 289 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 PDZD3Q86UT5 571 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 C17orf64Q86WR6 236 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 CCDC103Q8IW40 242 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 OR5AK3PQ8NH89 298 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 PSMA8Q8TAA3 256 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 ZNF675Q8TD23 568 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 TRIM43Q96BQ3 446 aaPredicted RBP13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 PDXPQ96GD0 296 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 FAM129BQ96TA1 746 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 NIPSNAP1Q9BPW8 284 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 NEURL2Q9BR09 285 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 BTBD2Q9BX70 525 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 ALOXE3Q9BYJ1 711 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 SLC6A16Q9GZN6 736 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 SPNS1Q9H2V7 528 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 RHBGQ9H310 441 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 DSN1Q9H410 356 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 A4GALTQ9NPC4 353 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 DYRK4Q9NR20 520 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 CLN6Q9NWW5 311 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 TAAR2Q9P1P5 351 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 DOLKQ9UPQ8 538 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 ASF1AQ9Y294 204 aa13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 KIF26AQ9ULI4 1882 aaPredicted RBP13.59□□□□□ -0.23
AP003555.1-202ENST00000511013 PRAMEF33A0A0G2JMD5 474 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 KRBA1A5PL33 1030 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 TMEM247A6NEH6 219 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 PRAMEF25A6NGN4 478 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 SAGE2PA6NJ88 616 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 PRAMEF10O60809 474 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 MMP20O60882 483 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 PDE9AO76083 593 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 RPN2P04844 631 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 DDCP20711 480 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 CBLP22681 906 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 C21orf33P30042 268 aaPredicted RBP13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 GSTM5P46439 218 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 NFE2L1Q14494 772 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 HNRNPA1L2Q32P51 320 aaKnown RBP13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 ZNF404Q494X3 552 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 C9orf64Q5T6V5 341 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 DEPDC1Q5TB30 811 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 GRASPQ7Z6J2 395 aaPredicted RBP13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 FAM129CQ86XR2 697 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 LACC1Q8IV20 430 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 ZNF547Q8IVP9 402 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 SLC44A2Q8IWA5 706 aaPredicted RBP13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 DCUN1D3Q8IWE4 304 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 TAGAPQ8N103 731 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 ZNF740Q8NDX6 193 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 NEURL3Q96EH8 262 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 AIF1LQ9BQI0 150 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 PITHD1Q9GZP4 211 aaPredicted RBP13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 PCBD2Q9H0N5 130 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 OR52A5Q9H2C5 316 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 IL23AQ9NPF7 189 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 TRNAU1APQ9NX07 287 aaKnown RBP13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 CNOT2Q9NZN8 540 aaKnown RBP13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 PNMA8BQ9ULN7 279 aaPredicted RBP13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 HCFC2Q9Y5Z7 792 aa13.58□□□□□ -0.23
AP003555.1-202ENST00000511013 CCDC88CQ9P219 2028 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 ISPDA4D126 451 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 METTL15A6NJ78 407 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 CACNB4O00305 520 aaPredicted RBP13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 PCDH17O14917 1159 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 SERPINB7O75635 380 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 STSP08842 583 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 ADRB3P13945 408 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 CEBPBP17676 345 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 GADD45AP24522 165 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 TPP2P29144 1249 aaPredicted RBP13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 CTNNB1P35222 781 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 BMPR1AP36894 532 aa13.58□□□□□ -0.24
AP003555.1-202ENST00000511013 ALDH9A1P49189 494 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms