RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 ZBTB49Q6ZSB9 765 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 SYVN1Q86TM6 617 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.9□□□□□ -1.62
PHF3-210ENST00000509876 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.9□□□□□ -1.62
PHF3-210ENST00000509876 ULK2Q8IYT8 1036 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 RNF148Q8N7C7 305 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 OR6Y1Q8NGX8 325 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.9□□□□□ -1.629e-7■■■■■ 28.1
PHF3-210ENST00000509876 THAP3Q8WTV1 239 aaPredicted RBP4.9□□□□□ -1.62
PHF3-210ENST00000509876 SH3GL2Q99962 352 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 LRRC61Q9BV99 259 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 ALOXE3Q9BYJ1 711 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 SLCO1B3Q9NPD5 702 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 SLAMF7Q9NQ25 335 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 FGF21Q9NSA1 209 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 MGAMO43451 1857 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 TMEM202A6NGA9 273 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 C17orf105B2RV13 164 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 C6orf47O95873 294 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 PVRP15151 417 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 OLR1P78380 273 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 ZNF605Q86T29 641 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 OR5AK3PQ8NH89 298 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 OR14A16Q8NHC5 309 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 MIPOL1Q8TD10 442 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 CCDC74BQ96LY2 380 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 ASPNQ9BXN1 380 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 IFT52Q9Y366 437 aa4.9□□□□□ -1.62
PHF3-210ENST00000509876 K7ESM1 405 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 CDC40O60508 579 aaKnown RBP eCLIP4.9□□□□□ -1.63
PHF3-210ENST00000509876 GFRA3O60609 400 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 PDE5AO76074 875 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 MT-CO3P00414 261 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 CSF2P04141 144 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 MMP2P08253 660 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 MYL12AP19105 171 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 CCNA2P20248 432 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 LHCGRP22888 699 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 CERS1P27544 350 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 FLYWCH1Q4VC44 716 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 MTX3Q5HYI7 312 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 TMEM71Q6P5X7 295 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 TTC33Q6PID6 262 aaPredicted RBP4.9□□□□□ -1.63
PHF3-210ENST00000509876 RFLNAQ6ZTI6 216 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 TECPR1Q7Z6L1 1165 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 NUP43Q8NFH3 380 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 BBS10Q8TAM1 723 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 CTRCQ99895 268 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 SOX17Q9H6I2 414 aaPredicted RBP4.9□□□□□ -1.63
PHF3-210ENST00000509876 RNF121Q9H920 327 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 EURLQ9NYK6 297 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 SLC17A4Q9Y2C5 497 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 PROM1O43490 865 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 IL33O95760 270 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 CST1P01037 141 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 GABRA3P34903 492 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 CAPZBP47756 277 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 ATP4BP51164 291 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 PSPHP78330 225 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 GABREP78334 506 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 PRDX1Q06830 199 aaKnown RBP4.9□□□□□ -1.63
PHF3-210ENST00000509876 SMU1Q2TAY7 513 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 PLK5Q496M5 336 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 IFI44LQ53G44 452 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 UNC50Q53HI1 259 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 ZNF550Q7Z398 422 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 HDDC2Q7Z4H3 204 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 STK32CQ86UX6 486 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 CCDC116Q8IYX3 515 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 DIO2Q92813 273 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 RNF31Q96EP0 1072 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 DMRT3Q9NQL9 472 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 PCTPQ9UKL6 214 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 SAMHD1Q9Y3Z3 626 aaKnown RBP4.9□□□□□ -1.63
PHF3-210ENST00000509876 PLEKHM1Q9Y4G2 1056 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 N6AMT1Q9Y5N5 214 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 C2orf92A0A1B0GVN3 265 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 A0A1B0GX78 115 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 FOXO6A8MYZ6 492 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 H0YGG7 62 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 KLF11O14901 512 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 RFPL1O75677 317 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 CBX6O95503 412 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 ALDOAP04075 364 aaKnown RBP4.9□□□□□ -1.63
PHF3-210ENST00000509876 ZNF28P17035 718 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 SCTRP47872 440 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 CLCN2P51788 898 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 CTBP2P56545 445 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 RAB38P57729 211 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 ARF3P61204 181 aaPredicted RBP4.9□□□□□ -1.63
PHF3-210ENST00000509876 SLC25A3Q00325 362 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 DCST1Q5T197 706 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 KANK2Q63ZY3 851 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 NET1Q7Z628 596 aaPredicted RBP4.9□□□□□ -1.63
PHF3-210ENST00000509876 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.9□□□□□ -1.63
PHF3-210ENST00000509876 ZNF595Q8IYB9 648 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 PLD6Q8N2A8 252 aaKnown RBP4.9□□□□□ -1.63
PHF3-210ENST00000509876 TP53I13Q8NBR0 393 aaPredicted RBP4.9□□□□□ -1.63
PHF3-210ENST00000509876 OR52E4Q8NGH9 312 aa4.9□□□□□ -1.63
PHF3-210ENST00000509876 ZNF480Q8WV37 535 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms