RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 S100A14Q9HCY8 104 aa3.44□□□□□ -1.86
HMGB1P28-201ENST00000507778 UBE2TQ9NPD8 197 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P28-201ENST00000507778 MOSPD1Q9UJG1 213 aa3.44□□□□□ -1.86
HMGB1P28-201ENST00000507778 APPL1Q9UKG1 709 aa3.44□□□□□ -1.86
HMGB1P28-201ENST00000507778 EXOC7Q9UPT5 735 aa3.44□□□□□ -1.86
HMGB1P28-201ENST00000507778 SMCHD1A6NHR9 2005 aa3.44□□□□□ -1.86
HMGB1P28-201ENST00000507778 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 SYCE3A1L190 88 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 SRRM4A7MD48 611 aaKnown RBP3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 K7EQD1 137 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 TFECO14948 347 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 INPP4BO15327 924 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 ZBTB14O43829 449 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 STBD1O95210 358 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 CPNE6O95741 557 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 ANGPTL1O95841 491 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 LYNP07948 512 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 B4GALT1P15291 398 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 AOC1P19801 751 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 OR1D2P34982 312 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 TNFSF10P50591 281 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 KCNK10P57789 538 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 IRX1P78414 480 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 GALK2Q01415 458 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 ZNF177Q13360 481 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 TSTA3Q13630 321 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 GK2Q14410 553 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 FASTKD3Q14CZ7 662 aaKnown RBP3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 NECTIN1Q15223 517 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 MRGPRG-AS1Q2M3A8 158 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 RFTN2Q52LD8 501 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 ZC2HC1BQ5TFG8 222 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 C3P1Q6ZMU1 363 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 STHQ8IWL8 128 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 METTL4Q8N3J2 472 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 C8orf46Q8TAG6 207 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 ATXN7L3BQ96GX2 97 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 ZNF560Q96MR9 790 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 AGAP4Q96P64 663 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 SSX3Q99909 188 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 NUSAP1Q9BXS6 441 aaKnown RBP3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 KCNK13Q9HB14 408 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 PRMT8Q9NR22 394 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 MED17Q9NVC6 651 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 NDE1Q9NXR1 346 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 SH3GLB1Q9Y371 365 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 MRPS18CQ9Y3D5 142 aaKnown RBP3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 OR1A2Q9Y585 309 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 TEX264Q9Y6I9 313 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 ABCC9O60706 1549 aa3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 SPAG9O60271 1321 aaKnown RBP3.43□□□□□ -1.86
HMGB1P28-201ENST00000507778 DHX29Q7Z478 1369 aaKnown RBP3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 ANHXE9PGG2 379 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 SLC28A1O00337 649 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 CCSO14618 274 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 OGTO15294 1046 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 B4GAT1O43505 415 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 TNFSF12O43508 249 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 HSF2BPO75031 334 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 ATP6V1G1O75348 118 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 NXPH4O95158 308 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 TRIM49P0CI25 452 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 TRIM49CP0CI26 452 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 AREGP15514 252 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 UGT1A6P19224 532 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 PKLRP30613 574 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 GCKRQ14397 625 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 CAPN13Q6MZZ7 669 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 RABEPKQ7Z6M1 372 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 CACUL1Q86Y37 369 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 CCDC197Q8NCU1 140 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 OR52B6Q8NGF0 335 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 OR4A16Q8NH70 328 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 GTF3AQ92664 365 aaKnown RBP3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 S1PR3Q99500 378 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 LGMNQ99538 433 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 SYT11Q9BT88 431 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 MCRIP2Q9BUT9 160 aaKnown RBP3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 TMEM245Q9H330 911 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 FAM212BQ9NTI7 297 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 THEGQ9P2T0 379 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 ASIC3Q9UHC3 531 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 UBQLN2Q9UHD9 624 aa3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 TRMT6Q9UJA5 497 aaKnown RBP3.42□□□□□ -1.86
HMGB1P28-201ENST00000507778 TRBV2A0A0J9YWF9 115 aa3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 MEX3AA1L020 520 aaKnown RBP3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 A8MU76 341 aa3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 G3V2L1 256 aa3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 TLR4O00206 839 aa3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 CALCAP01258 141 aa3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 SFTPBP07988 381 aa3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 ABHD2P08910 425 aa3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 CT45A8P0DMV1 189 aa3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 CT45A9P0DMV2 189 aa3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 ZNF18P17022 549 aa3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 RPL9P32969 192 aaKnown RBP3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 CLK1P49759 484 aaKnown RBP3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 FHITP49789 147 aa3.41□□□□□ -1.86
HMGB1P28-201ENST00000507778 LUMP51884 338 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms