RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 SLCO1B3Q9NPD5 702 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 FBXO6Q9NRD1 293 aaPredicted RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 P4HTMQ9NXG6 502 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 GPR83Q9NYM4 423 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 SLC7A8Q9UHI5 535 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 ZNF180Q9UJW8 692 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 CDC14AQ9UNH5 594 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 RUVBL2Q9Y230 463 aaKnown RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 FAM32AQ9Y421 112 aaKnown RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 KCNE1BA0A087WTH5 132 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 A0A088AWK7 358 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 CLEC18AA5D8T8 446 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 CCDC160A6NGH7 325 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 SLC16A5O15375 505 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 SERPINB7O75635 380 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 SLC16A8O95907 504 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 ALPPP05187 535 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 UMODP07911 640 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 ALOX5P09917 674 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 SMIM18P0DKX4 95 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 ALOX15P16050 662 aaPredicted RBP7.62□□□□□ -1.19
SCN1A-207ENST00000507401 CDH2P19022 906 aaPredicted RBP7.62□□□□□ -1.19
SCN1A-207ENST00000507401 CNTFP26441 200 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 SLC1A2P43004 574 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 RGS4P49798 205 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 VSX2P58304 361 aaPredicted RBP7.62□□□□□ -1.19
SCN1A-207ENST00000507401 AIMP2Q13155 320 aaKnown RBP7.62□□□□□ -1.19
SCN1A-207ENST00000507401 FASTKQ14296 549 aaKnown RBP7.62□□□□□ -1.19
SCN1A-207ENST00000507401 FRG1Q14331 258 aaKnown RBP7.62□□□□□ -1.19
SCN1A-207ENST00000507401 SLC9A5Q14940 896 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 IGFBP7Q16270 282 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 PRTGQ2VWP7 1150 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 TEDDM1Q5T9Z0 273 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 DEPDC1Q5TB30 811 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 VWA5B1Q5TIE3 1220 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 METTL21CQ5VZV1 264 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 FRMPD2BQ6IN97 320 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 ZNF425Q6IV72 752 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 JMJD6Q6NYC1 403 aaPredicted RBP7.62□□□□□ -1.19
SCN1A-207ENST00000507401 CLEC18BQ6UXF7 455 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 SYT9Q86SS6 491 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 SATL1Q86VE3 508 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 KCNMB4Q86W47 210 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 PAQR7Q86WK9 346 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 WDR75Q8IWA0 830 aaKnown RBP7.62□□□□□ -1.19
SCN1A-207ENST00000507401 LRRC56Q8IYG6 542 aaPredicted RBP7.62□□□□□ -1.19
SCN1A-207ENST00000507401 PDIK1LQ8N165 341 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 PQLC1Q8N2U9 271 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 GALNT16Q8N428 558 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 CLEC18CQ8NCF0 446 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 TNIP2Q8NFZ5 429 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 CEP70Q8NHQ1 597 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 CD200R1Q8TD46 325 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 MCOLN3Q8TDD5 553 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 CHPT1Q8WUD6 406 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 ZNF480Q8WV37 535 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 TM9SF4Q92544 642 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 PNPLA2Q96AD5 504 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 CCDC138Q96M89 665 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 OR2A5Q96R48 311 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 GPR21Q99679 349 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 SPOCK3Q9BQ16 436 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 NUDT9Q9BW91 350 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 YTHDF1Q9BYJ9 559 aaKnown RBP7.62□□□□□ -1.19
SCN1A-207ENST00000507401 PCBD2Q9H0N5 130 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 MRPS30Q9NP92 439 aaKnown RBP7.62□□□□□ -1.19
SCN1A-207ENST00000507401 SAYSD1Q9NPB0 183 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 SEMA3GQ9NS98 782 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 IARS2Q9NSE4 1012 aaKnown RBP7.62□□□□□ -1.19
SCN1A-207ENST00000507401 TMEM184CQ9NVA4 438 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 TAS2R13Q9NYV9 303 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 ZC3H7BQ9UGR2 993 aaKnown RBP7.62□□□□□ -1.19
SCN1A-207ENST00000507401 TBK1Q9UHD2 729 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 NBASA2RRP1 2371 aa7.62□□□□□ -1.19
SCN1A-207ENST00000507401 TNRC6AQ8NDV7 1962 aaKnown RBP7.61□□□□□ -1.19
SCN1A-207ENST00000507401 IGLV3-12A0A075B6K2 115 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 LOC105369274A0A096LPK9 316 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 IGKV1-8A0A0C4DH67 115 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 LOC102723532A0A0G2JNH3 316 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 A6NL46 340 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 ADARB2-AS1A8MUL3 147 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 E7ESA3 106 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 H0YGG7 62 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 KPNA4O00629 521 aaPredicted RBP7.61□□□□□ -1.19
SCN1A-207ENST00000507401 PCDH17O14917 1159 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 SUPT3HO75486 399 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 SORBS2O94875 1100 aaKnown RBP7.61□□□□□ -1.19
SCN1A-207ENST00000507401 BMP10O95393 424 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 AHSGP02765 367 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 C8GP07360 202 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 ERVK-10P10266 1014 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 MYL2P10916 166 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 PSMB5P28074 263 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 GABRB3P28472 473 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 OR1D4P47884 311 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 ALDH3B2P48448 385 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 MLLT10P55197 1068 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 ARPC4P59998 168 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 ARF3P61204 181 aaPredicted RBP7.61□□□□□ -1.19
SCN1A-207ENST00000507401 YBX1P67809 324 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms