RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ITLN2Q8WWU7 325 aaPredicted RBP13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 TSPYL1Q9H0U9 437 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 CAB39LQ9H9S4 337 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 PRM3Q9NNZ6 103 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 TIMMDC1Q9NPL8 285 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 MS4A12Q9NXJ0 267 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 OPTCQ9UBM4 332 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 FBXW2Q9UKT8 454 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 NPIPA1Q9UND3 350 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 CLCA3PQ9Y6N3 262 aa13.47□□□□□ -0.25
HMGCS1-203ENST00000507004 A0A087X1B8 175 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 K7EPI3 171 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 DYRK3O43781 588 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 SCELO95171 688 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 LTA4HP09960 611 aaKnown RBP13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 ABOP16442 354 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 PPP2R1BP30154 601 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 PHBP35232 272 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 SSR4P51571 173 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 LIM2P55344 173 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 PHEXP78562 749 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 STX4Q12846 297 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 SLMAPQ14BN4 828 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 OR4D1Q15615 310 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 FAM83EQ2M2I3 478 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 AP5B1Q2VPB7 878 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 KBTBD12Q3ZCT8 623 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 METTL2BQ6P1Q9 378 aaKnown RBP13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 PAOXQ6QHF9 649 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 RGS9BPQ6ZS82 235 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 ZNF572Q7Z3I7 529 aaPredicted RBP13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 ISCA2Q86U28 154 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 SIAH3Q8IW03 269 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 LAS2Q8IYD9 372 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 CYP4Z2PQ8N1L4 340 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 OR5L2Q8NGL0 311 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 FBXO25Q8TCJ0 367 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 UBTD2Q8WUN7 234 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 MARVELD3Q96A59 401 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 CMTM7Q96FZ5 175 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 AICDAQ9GZX7 198 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 PNO1Q9NRX1 252 aaKnown RBP13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 VTI1BQ9UEU0 232 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 ZNF490Q9ULM2 529 aaPredicted RBP13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 ACOT9Q9Y305 439 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 TSC22D4Q9Y3Q8 395 aa13.46□□□□□ -0.25
HMGCS1-203ENST00000507004 CROCCQ5TZA2 2017 aa13.46□□□□□ -0.26
HMGCS1-203ENST00000507004 CTAGE15A4D2H0 777 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 A8MUA0 341 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 C4orf51C9J302 202 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 CYR61O00622 381 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 MAN1A2O60476 641 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 ITGA10O75578 1167 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 C1QAP02745 245 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 IFNA16P05015 189 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 COX7A2P14406 83 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 EPB42P16452 691 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 MSH2P43246 934 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 PIK3CGP48736 1102 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 GPR143P51810 404 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 GPX6P59796 221 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 C2orf54Q08AI8 447 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 BMPR2Q13873 1038 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 C3AR1Q16581 482 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 ZNF630Q2M218 657 aaPredicted RBP13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 C18orf21Q32NC0 220 aaPredicted RBP13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 KLC3Q6P597 504 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 HSDL2Q6YN16 418 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 CTAGE6Q86UF2 777 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 CCDC25Q86WR0 208 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 LURAP1LQ8IV03 231 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 SPATA6LQ8N4H0 392 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 C16orf52Q8NHV5 167 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 ZNF473Q8WTR7 871 aaKnown RBP13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 NCLNQ969V3 563 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 REPS1Q96D71 796 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 MS4A8Q9BY19 250 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 HES7Q9BYE0 225 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 ALG9Q9H6U8 611 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 PRDM7Q9NQW5 492 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 ANGPTL3Q9Y5C1 460 aa13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 TNPO3Q9Y5L0 923 aaKnown RBP13.45□□□□□ -0.26
HMGCS1-203ENST00000507004 A0A0G2JN53 185 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 A8MVJ9 347 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 SUPT3HB4E1H0 165 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 E9PLN8 166 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 TFECO14948 347 aaPredicted RBP13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 FANCGO15287 622 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 UGDHO60701 494 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 SUPT3HO75486 399 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 TUBB4AP04350 444 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 SLC35E2BP0CK96 405 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 HIST1H1TP22492 207 aaPredicted RBP13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 CERS1P27544 350 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 TLX1P31314 330 aaPredicted RBP13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 PIK3CBP42338 1070 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 TBL3Q12788 808 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 ZNF468Q5VIY5 522 aaPredicted RBP13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 LIPJQ5W064 366 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 GRHL2Q6ISB3 625 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms