RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ADAP00813 363 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 COX7A2P14406 83 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 TACR1P25103 407 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 INPP1P49441 399 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 CRYBA2P53672 197 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 SNRPD2P62316 118 aaKnown RBP15.23■□□□□ 0.03
SCLT1-208ENST00000506368 RGNQ15493 299 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 ANKRD54Q6NXT1 300 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 KLHL17Q6TDP4 642 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 ZNF730Q6ZMV8 503 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 LAS2Q8IYD9 372 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 LRRC17Q8N6Y2 441 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 C3orf58Q8NDZ4 430 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 ATP6V1C2Q8NEY4 427 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 FAM193BQ96PV7 902 aaPredicted RBP15.23■□□□□ 0.03
SCLT1-208ENST00000506368 FAM129BQ96TA1 746 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 TMEM184CQ9NVA4 438 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 RLIMQ9NVW2 624 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 OGDHLQ9ULD0 1010 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 NDRG2Q9UN36 371 aaKnown RBP15.23■□□□□ 0.03
SCLT1-208ENST00000506368 FKBP7Q9Y680 259 aa15.23■□□□□ 0.03
SCLT1-208ENST00000506368 KCNE1BA0A087WTH5 132 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 TMEM229AB2RXF0 380 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 I3L521 148 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 M0QZQ0 153 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 TLR4O00206 839 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 TNFRSF21O75509 655 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 GJB3O75712 270 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 SNAPC5O75971 98 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 PRAMEF1O95521 474 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 PRLP01236 227 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 RAF1P04049 648 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 LHCGRP22888 699 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 ACVRL1P37023 503 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 SOX3P41225 446 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 ASMTP46597 345 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 POU6F2P78424 691 aaPredicted RBP15.22■□□□□ 0.03
SCLT1-208ENST00000506368 RING1Q06587 406 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 MBTPS1Q14703 1052 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 KCNA10Q16322 511 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 OCLNQ16625 522 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 UGT8Q16880 541 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 PLK5Q496M5 336 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 MZT2AQ6P582 158 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 GALNT10Q86SR1 603 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 ADGRG3Q86Y34 549 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 SLC30A8Q8IWU4 369 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 ZBTB2Q8N680 514 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 SLC37A3Q8NCC5 494 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 DNAJB3Q8WWF6 145 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 ZBED6CLQ96FA7 236 aaPredicted RBP15.22■□□□□ 0.03
SCLT1-208ENST00000506368 NELL2Q99435 816 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 ZSCAN5AQ9BUG6 496 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 APOL5Q9BWW9 433 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 CRISPLD1Q9H336 500 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 TMLHEQ9NVH6 421 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 ZNF451Q9Y4E5 1061 aa15.22■□□□□ 0.03
SCLT1-208ENST00000506368 C1orf226A1L170 272 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 MEN1O00255 615 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 SLC9A3R1O14745 358 aaPredicted RBP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 SLC30A4O14863 429 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 SMAD6O43541 496 aaKnown RBP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 AP2A2O94973 939 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 F2P00734 622 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 DDX5P17844 614 aaKnown RBP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 FGF9P31371 208 aaPredicted RBP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 CNR2P34972 360 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 XCR1P46094 333 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 STK19P49842 368 aaPredicted RBP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 CPSF6Q16630 551 aaKnown RBP eCLIP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 CXCL17Q6UXB2 119 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 OR8J1Q8NGP2 316 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 ZNF431Q8TF32 576 aaPredicted RBP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 DPH2Q9BQC3 489 aaPredicted RBP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 LATS2Q9NRM7 1088 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 DIMT1Q9UNQ2 313 aaKnown RBP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 RUVBL1Q9Y265 456 aaKnown RBP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 CDH10Q9Y6N8 788 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 QSOX1O00391 747 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 GADD45GO95257 159 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 CPSF4O95639 269 aaKnown RBP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 HLA-EP13747 358 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 RHCEP18577 417 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 EN2P19622 333 aaPredicted RBP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 TYMPP19971 482 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 IRS1P35568 1242 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 GDF5P43026 501 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 MAN2A2P49641 1150 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 MNX1P50219 401 aaPredicted RBP15.21■□□□□ 0.03
SCLT1-208ENST00000506368 MGAT3Q09327 533 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 ILKQ13418 452 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 GALEQ14376 348 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 SLC25A30Q5SVS4 291 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 PXDC1Q5TGL8 231 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 TMEM107Q6UX40 140 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 PRSS42Q7Z5A4 293 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 CDH24Q86UP0 819 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 KLHDC9Q8NEP7 349 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 PIH1D2Q8WWB5 315 aa15.21■□□□□ 0.03
SCLT1-208ENST00000506368 UPRTQ96BW1 309 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms