RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 KRT78Q8N1N4 520 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 RPRMLQ8N4K4 120 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 PSD4Q8NDX1 1056 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 FBXO36Q8NEA4 188 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 TTLQ8NG68 377 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 OR2L5Q8NG80 312 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 ASB15Q8WXK1 588 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 ESAMQ96AP7 390 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 VPS39Q96JC1 886 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 CAPZA3Q96KX2 299 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 CSF3RQ99062 836 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 TREX2Q9BQ50 279 aaPredicted RBP10.57□□□□□ -0.72
SIL1-208ENST00000505945 TRIM31Q9BZY9 425 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 REXO4Q9GZR2 422 aaKnown RBP10.57□□□□□ -0.72
SIL1-208ENST00000505945 NT5DC2Q9H857 520 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 ADAP2Q9NPF8 381 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 PLSCR2Q9NRY7 297 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 HPF1Q9NWY4 346 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 MYOTQ9UBF9 498 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 ZNF490Q9ULM2 529 aaPredicted RBP10.57□□□□□ -0.72
SIL1-208ENST00000505945 RNF6Q9Y252 685 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 MRPS33Q9Y291 106 aaKnown RBP10.57□□□□□ -0.72
SIL1-208ENST00000505945 CLCA3PQ9Y6N3 262 aa10.57□□□□□ -0.72
SIL1-208ENST00000505945 A0A088AWK7 358 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 A0A0G2JMM0 328 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 A0A1W2PPB8 328 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 A0A1W2PRS3 328 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 FAM90A27PA6NNH2 459 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 KIR3DP1A8MWS1 328 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 NPIPA2E9PIF3 369 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 NPIPA3F8WFD2 350 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 G3V3Y1 287 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 CTNSO60931 367 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 CLEC3AO75596 197 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 TCP1P17987 556 aaKnown RBP10.56□□□□□ -0.72
SIL1-208ENST00000505945 ZNF10P21506 573 aaPredicted RBP10.56□□□□□ -0.72
SIL1-208ENST00000505945 CERS1P27544 350 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 CHRNB4P30926 498 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 SOX3P41225 446 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 MTTPP55157 894 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 LIM2P55344 173 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 RIPPLY3P57055 190 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 PPIAP62937 165 aaKnown RBP10.56□□□□□ -0.72
SIL1-208ENST00000505945 PLGLB1Q02325 96 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 PMPCAQ10713 525 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 TESK1Q15569 626 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 TGFBIQ15582 683 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 ELAVL1Q15717 326 aaKnown RBP10.56□□□□□ -0.72
SIL1-208ENST00000505945 ZNF750Q32MQ0 723 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 ADPRMQ3LIE5 342 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 TRIM40Q6P9F5 258 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 ABHD17CQ6PCB6 329 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 HSDL2Q6YN16 418 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 CDH24Q86UP0 819 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 CCDC71Q8IV32 467 aaPredicted RBP10.56□□□□□ -0.72
SIL1-208ENST00000505945 TMEM132CQ8N3T6 1108 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 ZNF321PQ8N8H1 164 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 OR2M7Q8NG81 312 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 LILRB4Q8NHJ6 448 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 PTPMT1Q8WUK0 201 aaPredicted RBP10.56□□□□□ -0.72
SIL1-208ENST00000505945 ASB5Q8WWX0 329 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 RND1Q92730 232 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 F2RL3Q96RI0 385 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 RASL10BQ96S79 203 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 SERINC2Q96SA4 455 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 TMEM79Q9BSE2 394 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 CAPS2Q9BXY5 557 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 ALOXE3Q9BYJ1 711 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 TP63Q9H3D4 680 aaPredicted RBP10.56□□□□□ -0.72
SIL1-208ENST00000505945 RHOJQ9H4E5 214 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 CAB39LQ9H9S4 337 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 NPDC1Q9NQX5 325 aaPredicted RBP10.56□□□□□ -0.72
SIL1-208ENST00000505945 SMYD2Q9NRG4 433 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 WWOXQ9NZC7 414 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 GPRC5BQ9NZH0 403 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 VTI1BQ9UEU0 232 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 DAPP1Q9UN19 280 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 MTO1Q9Y2Z2 717 aaKnown RBP10.56□□□□□ -0.72
SIL1-208ENST00000505945 EML6Q6ZMW3 1958 aa10.56□□□□□ -0.72
SIL1-208ENST00000505945 HCFC1P51610 2035 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 CLGNO14967 610 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 FANCGO15287 622 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 ZSCAN12O43309 604 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 TOXO94900 526 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 SEC31AO94979 1220 aaKnown RBP10.55□□□□□ -0.72
SIL1-208ENST00000505945 TNNI3P19429 210 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 GSTM2P28161 218 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 GGT5P36269 586 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 HSPA7P48741 367 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 HK2P52789 917 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 SLC12A2P55011 1212 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 STX4Q12846 297 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 DOC2AQ14183 400 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 EFTUD2Q15029 972 aaKnown RBP eCLIP10.55□□□□□ -0.72
SIL1-208ENST00000505945 GXYLT1Q4G148 440 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 PAOXQ6QHF9 649 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 CAPN12Q6ZSI9 719 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 GPSM1Q86YR5 675 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 GPALPP1Q8IXQ4 340 aa10.55□□□□□ -0.72
SIL1-208ENST00000505945 SNX31Q8N9S9 440 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms