RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 PLEKHA6Q9Y2H5 1048 aa14.94□□□□□ -0.02
PDLIM7-213ENST00000505074 SNX24Q9Y343 169 aa14.94□□□□□ -0.02
PDLIM7-213ENST00000505074 A0A088AWK7 358 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 TRBV11-1A0A0K0K1C0 115 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 A0A1B0GTH9 108 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 TCRBV16S1A1N1A0A5B0 115 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 CLGNO14967 610 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 ERI3O43414 337 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 PROM1O43490 865 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 KLK8O60259 260 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 PIAS1O75925 651 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 MYO1DO94832 1006 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 C1GALT1C1LP0DN25 315 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 ZNF10P21506 573 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 ADSLP30566 484 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 MEOX1P50221 254 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 DGKQP52824 942 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 MRPS25P82663 173 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 SLC13A2Q13183 592 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 RNFT1Q5M7Z0 435 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 TMIGD1Q6UXZ0 262 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 SPATA6LQ8N4H0 392 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 CPSF7Q8N684 471 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 SNX31Q8N9S9 440 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 FAM47BQ8NA70 645 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 MYRIPQ8NFW9 859 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 TTLQ8NG68 377 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 CREB3L4Q8TEY5 395 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 PYROXD1Q8WU10 500 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 ANKRD7Q92527 254 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 CDKL2Q92772 493 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 GAL3ST3Q96A11 431 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 PDLIM2Q96JY6 352 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 SMR3AQ99954 134 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 TP63Q9H3D4 680 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 COPS7BQ9H9Q2 264 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 CAB39LQ9H9S4 337 aa14.93□□□□□ -0.02
PDLIM7-213ENST00000505074 ANKDD1BA6NHY2 528 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 B3GALT2O43825 422 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 NME2P1O60361 137 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 S100BP04271 92 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 NME2P22392 152 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 RPL21P46778 160 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 CLCN2P51788 898 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 PLA2G16P53816 162 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 MLF1P58340 268 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 CALCOCO2Q13137 446 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 FBXO48Q5FWF7 155 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 CAMKMTQ7Z624 323 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 CCDC71Q8IV32 467 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 TMEM156Q8N614 296 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 BBOF1Q8ND07 529 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 EXT2Q93063 718 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 RHBDF1Q96CC6 855 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 TSPAN17Q96FV3 270 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 C18orf12Q96KH6 178 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 CCDC77Q9BR77 488 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 DPH5Q9H2P9 285 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 CNOT10Q9H9A5 744 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 POPDC3Q9HBV1 291 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 SAYSD1Q9NPB0 183 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 PRTFDC1Q9NRG1 225 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 MOCS1Q9NZB8 636 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 MRPS33Q9Y291 106 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 MMACHCQ9Y4U1 282 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 HRH3Q9Y5N1 445 aa14.92□□□□□ -0.02
PDLIM7-213ENST00000505074 RTTNQ86VV8 2226 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 IGKV3D-11A0A0A0MRZ8 115 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 CLDN4O14493 209 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 CDK2AP1O14519 115 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 TFECO14948 347 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 PHGDHO43175 533 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 CDC40O60508 579 aaKnown RBP eCLIP14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 CCDC166P0CW27 439 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 SMIM10L1P0DMW3 83 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 HNRNPH1P31943 449 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 HPDP32754 393 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 RFC3P40938 356 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 SLC6A12P48065 614 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 HLCSP50747 726 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 POU4F1Q01851 419 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 TGFBIQ15582 683 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 TMEM198Q66K66 360 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 TRIM40Q6P9F5 258 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 SLCO4C1Q6ZQN7 724 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 ACAD11Q709F0 780 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 CLNKQ7Z7G1 428 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 GPSM1Q86YR5 675 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 KLHDC8AQ8IYD2 350 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 CYP4Z2PQ8N1L4 340 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 TCAIMQ8N3R3 496 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 POGLUT1Q8NBL1 392 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 B3GNT7Q8NFL0 401 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 SPATA3Q8NHX4 192 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 SREK1Q8WXA9 508 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 ANP32BQ92688 251 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 SMIM10Q96HG1 83 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 SEC16BQ96JE7 1060 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 CAPS2Q9BXY5 557 aa14.91□□□□□ -0.02
PDLIM7-213ENST00000505074 DERL2Q9GZP9 239 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms