RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 NEMP1O14524 444 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 LEFTY1O75610 366 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MBL2P11226 248 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PRKCHP24723 683 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 TNFRSF8P28908 595 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 DDTP30046 118 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 GNA15P30679 374 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SREBF1P36956 1147 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 CXCR4P61073 352 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 OSTNP61366 133 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PPP3R1P63098 170 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 GHRHRQ02643 423 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 NR6A1Q15406 480 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF484Q5JVG2 852 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 HIST2H3PS2Q5TEC6 136 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 QSOX2Q6ZRP7 698 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 OR5M1Q8NGP8 315 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 NT5C3BQ969T7 300 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MYRFLQ96LU7 910 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PLEKHF1Q96S99 279 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 GPA33Q99795 319 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF649Q9BS31 505 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 AARSD1Q9BTE6 412 aaKnown RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 RAB11FIP5Q9BXF6 653 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SMIM3Q9BZL3 60 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 GPATCH2Q9NW75 528 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 COMMD9Q9P000 198 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SCP2D1Q9UJQ7 156 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 TRAF6Q9Y4K3 522 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MMACHCQ9Y4U1 282 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 HEMK1Q9Y5R4 338 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ACTL7BQ9Y614 415 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PTCH1Q13635 1447 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 LEFTY2O00292 366 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 NPHS1O60500 1241 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 KCNK2O95069 426 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 DCKP27707 260 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 NUDT2P50583 147 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 GPR143P51810 404 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ERVFRD-1P60508 538 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ACTA2P62736 377 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ACTG2P63267 376 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ACTC1P68032 377 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ACTA1P68133 377 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 TLE1Q04724 770 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 GXYLT1Q4G148 440 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PDSS1Q5T2R2 415 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 WDR59Q6PJI9 974 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 THNSL2Q86YJ6 484 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 LGI2Q8N0V4 545 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 GCNT2Q8N0V5 402 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 LMNTD1Q8N9Z9 388 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 DNAAF1Q8NEP3 725 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 OR13G1Q8NGZ3 307 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MBD3L1Q8WWY6 194 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 NINJ1Q92982 152 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PTP4A1Q93096 173 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PGM2Q96G03 612 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 HSPA12BQ96MM6 686 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 TRIB1Q96RU8 372 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ZBTB3Q9H5J0 574 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SPAG4Q9NPE6 437 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 FAM49BQ9NUQ9 324 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 CALML5Q9NZT1 146 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 GHRLQ9UBU3 117 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 UBE2QL1A1L167 161 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 C19orf67A6NJJ6 358 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 LEUTXA8MZ59 168 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 HCN1O60741 890 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 ERAL1O75616 437 aaKnown RBP6.02□□□□□ -1.45
CLCN3-204ENST00000504131 UCHL3P15374 230 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 MGAT1P26572 445 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 MAN2A2P49641 1150 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 RPL23AP62750 156 aaKnown RBP6.02□□□□□ -1.45
CLCN3-204ENST00000504131 FAM189BP81408 668 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 CSHL1Q14406 222 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 HAGHQ16775 308 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 CDO1Q16878 200 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 MARCH8Q5T0T0 291 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 PIGWQ7Z7B1 504 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 KIAA0907Q7Z7F0 614 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-204ENST00000504131 OR5D18Q8NGL1 313 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 CREB3L4Q8TEY5 395 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 NKD1Q969G9 470 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 HOPXQ9BPY8 73 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-204ENST00000504131 WDR11Q9BZH6 1224 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 SLITRK2Q9H156 845 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 ZNF696Q9H7X3 374 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 ANKHQ9HCJ1 492 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 ABHD10Q9NUJ1 306 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 SLC38A7Q9NVC3 462 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 METP08581 1390 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 USP32Q8NFA0 1604 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 TVP23AA6NH52 213 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 KDELR3O43731 214 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 PDE6DO43924 150 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 TAF5LO75529 589 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 BANF1O75531 89 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 DFFBO76075 338 aa6.02□□□□□ -1.45
CLCN3-204ENST00000504131 INHAP05111 366 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms