RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 PRUNE2Q8WUY3 3088 aa4.95□□□□□ -1.62
NIPBL-203ENST00000503274 MROH7Q68CQ1 1323 aa4.95□□□□□ -1.62
NIPBL-203ENST00000503274 IGKV6D-41A0A0C4DH26 115 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 C2CD4DB7Z1M9 353 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 H7C0S8 307 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 H7C423 109 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 RANBP6O60518 1105 aaKnown RBP4.94□□□□□ -1.62
NIPBL-203ENST00000503274 CABYRO75952 493 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 KRT33AO76009 404 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 PGK1P00558 417 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 PRKAR1AP10644 381 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 PCP11498 1178 aaKnown RBP4.94□□□□□ -1.62
NIPBL-203ENST00000503274 ACAT1P24752 427 aaKnown RBP4.94□□□□□ -1.62
NIPBL-203ENST00000503274 PTAFRP25105 342 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 PSMA3P25788 255 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 OPRL1P41146 370 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 NT5C2P49902 561 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 ZNF41P51814 821 aaPredicted RBP4.94□□□□□ -1.62
NIPBL-203ENST00000503274 ACLYP53396 1101 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 E2F5Q15329 346 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 ALX1Q15699 326 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 PTGISQ16647 500 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 LACTB2Q53H82 288 aaPredicted RBP4.94□□□□□ -1.62
NIPBL-203ENST00000503274 LYSMD4Q5XG99 296 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 IQUBQ8NA54 791 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 ZNF485Q8NCK3 441 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 OR6S1Q8NH40 331 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 ZNRF4Q8WWF5 429 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 ZNF486Q96H40 463 aaPredicted RBP4.94□□□□□ -1.62
NIPBL-203ENST00000503274 USP28Q96RU2 1077 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 KATNB1Q9BVA0 655 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 FGFBP2Q9BYJ0 223 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 EGLN1Q9GZT9 426 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 RWDD1Q9H446 243 aaPredicted RBP4.94□□□□□ -1.62
NIPBL-203ENST00000503274 ACTL8Q9H568 366 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 RAVER2Q9HCJ3 691 aaKnown RBP4.94□□□□□ -1.62
NIPBL-203ENST00000503274 PFDN4Q9NQP4 134 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 ASIC3Q9UHC3 531 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 ZNF236Q9UL36 1845 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 ELP1O95163 1332 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 MYO9BQ13459 2157 aa4.94□□□□□ -1.62
NIPBL-203ENST00000503274 ALPK3Q96L96 1907 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 PLIN4Q96Q06 1357 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 A0A1B0GU03 582 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 H0YAE9 185 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 CCDC188H7C350 402 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 HIP1O00291 1037 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 TEX28O15482 410 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 DUS4LO95620 317 aaKnown RBP4.93□□□□□ -1.62
NIPBL-203ENST00000503274 ATP1B1P05026 303 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 FDPSP14324 419 aaKnown RBP4.93□□□□□ -1.62
NIPBL-203ENST00000503274 CYP2A7P20853 494 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 MMP12P39900 470 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 CSNK2BP67870 215 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 GUCY2DQ02846 1103 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 OPCMLQ14982 345 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 C6orf136Q5SQH8 315 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 IL27RAQ6UWB1 636 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 LEKR1Q6ZMV7 388 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 Q6ZRP5 223 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 C11orf57Q6ZUT1 292 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-203ENST00000503274 ARMCX2Q7L311 632 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 ANKRD33Q7Z3H0 272 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 CCAR2Q8N163 923 aaKnown RBP4.93□□□□□ -1.62
NIPBL-203ENST00000503274 Q8NFD4 153 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 METTL21AQ8WXB1 218 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 PIK3R3Q92569 461 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 BADQ92934 168 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 TSACCQ96A04 125 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-203ENST00000503274 TTC28Q96AY4 2481 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 SPAG5Q96R06 1193 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 TRIM51Q9BSJ1 452 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 AP1M1Q9BXS5 423 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 MTIF3Q9H2K0 278 aaKnown RBP4.93□□□□□ -1.62
NIPBL-203ENST00000503274 RNF41Q9H4P4 317 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-203ENST00000503274 RLFQ13129 1914 aa4.93□□□□□ -1.62
NIPBL-203ENST00000503274 NCOR1O75376 2440 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 MYH4Q9Y623 1939 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 A0A087WUV0 522 aaPredicted RBP4.92□□□□□ -1.62
NIPBL-203ENST00000503274 A0A0U1RQG5 324 aaPredicted RBP4.92□□□□□ -1.62
NIPBL-203ENST00000503274 A0A1W2PR80 420 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 DCXO43602 365 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 MOCS3O95396 460 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 SNAI1O95863 264 aaPredicted RBP4.92□□□□□ -1.62
NIPBL-203ENST00000503274 TIMP1P01033 207 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 ASGR1P07306 291 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 TOP1P11387 765 aaKnown RBP4.92□□□□□ -1.62
NIPBL-203ENST00000503274 RPL35AP18077 110 aaKnown RBP4.92□□□□□ -1.62
NIPBL-203ENST00000503274 CETN2P41208 172 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 MTCP1P56278 107 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 SGCGQ13326 291 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 TRIM29Q14134 588 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 EFTUD2Q15029 972 aaKnown RBP eCLIP4.92□□□□□ -1.62
NIPBL-203ENST00000503274 SHHQ15465 462 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 Q7L0L9 218 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 SLFN11Q7Z7L1 901 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 IQCA1Q86XH1 822 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 FAM133AQ8N9E0 248 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 ESR2Q92731 530 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 SLCO2A1Q92959 643 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms