RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 KHDRBS2Q5VWX1 349 aaKnown RBP17.22■□□□□ 0.35
HOXD11-202ENST00000498438 LIPJQ5W064 366 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 CHSY3Q70JA7 882 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 CLNKQ7Z7G1 428 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 ZGRF1Q86YA3 2104 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 ZNF595Q8IYB9 648 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 GSPT2Q8IYD1 628 aaKnown RBP17.22■□□□□ 0.35
HOXD11-202ENST00000498438 NFAM1Q8NET5 270 aaPredicted RBP17.22■□□□□ 0.35
HOXD11-202ENST00000498438 HUS1BQ8NHY5 278 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 PRR7Q8TB68 274 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 FAR1Q8WVX9 515 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 PHF21BQ96EK2 531 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 CMTM7Q96FZ5 175 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 OR51B5Q9H339 312 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 IPPKQ9H8X2 491 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 DMRT3Q9NQL9 472 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 ABI3Q9P2A4 366 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 CLDN16Q9Y5I7 305 aa17.22■□□□□ 0.35
HOXD11-202ENST00000498438 SAP18O00422 153 aaKnown RBP17.21■□□□□ 0.35
HOXD11-202ENST00000498438 UGDHO60701 494 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 PRAMEF2O60811 474 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 SEMA7AO75326 666 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 MYO1DO94832 1006 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 SCELO95171 688 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 COL6A2P12110 1019 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 ATP5A1P25705 553 aaKnown RBP17.21■□□□□ 0.35
HOXD11-202ENST00000498438 PPP2R1BP30154 601 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 PIK3CBP42338 1070 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 SSR2P43308 183 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 TUBA3CQ13748 450 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 RCN2Q14257 317 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 METTL2BQ6P1Q9 378 aaKnown RBP17.21■□□□□ 0.35
HOXD11-202ENST00000498438 TUBA3EQ6PEY2 450 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 BCORP1Q8N888 145 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 ACOT4Q8N9L9 421 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 ST6GALNAC3Q8NDV1 305 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 SUN3Q8TAQ9 357 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 TAAR6Q96RI8 345 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 MTERF1Q99551 399 aaKnown RBP17.21■□□□□ 0.35
HOXD11-202ENST00000498438 MAPKAP1Q9BPZ7 522 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 TXLNGYQ9BZA5 131 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 LYRM4Q9HD34 91 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 PNO1Q9NRX1 252 aaKnown RBP17.21■□□□□ 0.35
HOXD11-202ENST00000498438 ANKRD10Q9NXR5 420 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 ADGRE2Q9UHX3 823 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 TMCO1Q9UM00 188 aa17.21■□□□□ 0.35
HOXD11-202ENST00000498438 GABRR3A8MPY1 467 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 STX16-NPEPL1H3BU86 382 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 STX16O14662 325 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 SMIM24O75264 130 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 HIST1H1TP22492 207 aaPredicted RBP17.2■□□□□ 0.34
HOXD11-202ENST00000498438 RAP1GDS1P52306 607 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 ELOAQ14241 798 aaKnown RBP17.2■□□□□ 0.34
HOXD11-202ENST00000498438 TERF2Q15554 542 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 CPSF6Q16630 551 aaKnown RBP eCLIP17.2■□□□□ 0.34
HOXD11-202ENST00000498438 AP5B1Q2VPB7 878 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 DEPDC1Q5TB30 811 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 ADGRD1Q6QNK2 874 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 LGI4Q8N135 537 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 L3MBTL4Q8NA19 623 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 REPS1Q96D71 796 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 SLX1AQ9BQ83 275 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 MRPL57Q9BQC6 102 aaKnown RBP17.2■□□□□ 0.34
HOXD11-202ENST00000498438 UTP23Q9BRU9 249 aaKnown RBP17.2■□□□□ 0.34
HOXD11-202ENST00000498438 SORBS1Q9BX66 1292 aaKnown RBP17.2■□□□□ 0.34
HOXD11-202ENST00000498438 MRPL46Q9H2W6 279 aaKnown RBP17.2■□□□□ 0.34
HOXD11-202ENST00000498438 CDCP1Q9H5V8 836 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 NOL11Q9H8H0 719 aaKnown RBP17.2■□□□□ 0.34
HOXD11-202ENST00000498438 OLAHQ9NV23 265 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 KCMF1Q9P0J7 381 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 PCTPQ9UKL6 214 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 RNF11Q9Y3C5 154 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 TSC22D4Q9Y3Q8 395 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 PCDHGA11Q9Y5H2 935 aa17.2■□□□□ 0.34
HOXD11-202ENST00000498438 H0YIV9 168 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 OR7A17O14581 309 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 ARL1P40616 181 aaPredicted RBP17.19■□□□□ 0.34
HOXD11-202ENST00000498438 RPS13P62277 151 aaKnown RBP17.19■□□□□ 0.34
HOXD11-202ENST00000498438 PHEXP78562 749 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 ZNF766Q5HY98 468 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 LGSNQ5TDP6 509 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 RPS19BP1Q86WX3 136 aaKnown RBP17.19■□□□□ 0.34
HOXD11-202ENST00000498438 APCDD1LQ8NCL9 501 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 MDS2Q8NDY4 140 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 B3GNT7Q8NFL0 401 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 OR52B6Q8NGF0 335 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 MTBPQ96DY7 904 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 NSUN5Q96P11 429 aaKnown RBP17.19■□□□□ 0.34
HOXD11-202ENST00000498438 SIGLEC12Q96PQ1 595 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 CDK15Q96Q40 435 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 CENPKQ9BS16 269 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 EPB41L4BQ9H329 900 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 ADAP2Q9NPF8 381 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 FBXW2Q9UKT8 454 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 ICE1Q9Y2F5 2266 aa17.19■□□□□ 0.34
HOXD11-202ENST00000498438 TRBV11-1A0A0K0K1C0 115 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 MYOCOSA0A1B0GUC4 107 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 BLACEA4D250 179 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 PLPP1O14494 284 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 CTNSO60931 367 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms