RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 DOCK1Q14185 1865 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 AHCYL1O43865 530 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 SNAP91O60641 907 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 ATP6AP2O75787 350 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 FOLR2P14207 255 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 MYOGP15173 224 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 CLDN15P56746 228 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 PPIL2Q13356 520 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 ALCAMQ13740 583 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 VGLL4Q14135 290 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 NONOQ15233 471 aaKnown RBP eCLIP4.22□□□□□ -1.73
MDM2-220ENST00000496959 FGD3Q5JSP0 725 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 FAM182AQ5T1J6 154 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 KRT39Q6A163 491 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 ANKRD23Q86SG2 305 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 ZNF584Q8IVC4 421 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 MAML2Q8IZL2 1156 aaPredicted RBP4.22□□□□□ -1.73
MDM2-220ENST00000496959 POGLUT1Q8NBL1 392 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 SECISBP2LQ93073 1101 aaKnown RBP4.22□□□□□ -1.73
MDM2-220ENST00000496959 OTUB1Q96FW1 271 aaPredicted RBP4.22□□□□□ -1.73
MDM2-220ENST00000496959 ZNF597Q96LX8 424 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 MUS81Q96NY9 551 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 ATF6BQ99941 703 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 SDCBP2Q9H190 292 aa4.22□□□□□ -1.73
MDM2-220ENST00000496959 KIF16BQ96L93 1317 aa4.21□□□□□ -1.73
MDM2-220ENST00000496959 ZSWIM8A7E2V4 1837 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 ALPK3Q96L96 1907 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 CLRN2A0PK11 232 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 G3V2L1 256 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 ZNF853P0CG23 659 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 NR2F1P10589 423 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 AOC1P19801 751 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 CDC25CP30307 473 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 ETV5P41161 510 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 CLCN4P51793 760 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 LIMK1P53667 647 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 ILF2Q12905 390 aaKnown RBP4.21□□□□□ -1.74
MDM2-220ENST00000496959 RALGDSQ12967 914 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 CCDC57Q2TAC2 916 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 CAVIN4Q5BKX8 364 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 ARMC4Q5T2S8 1044 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 GPR139Q6DWJ6 353 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 PHC2Q8IXK0 858 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 TCEANCQ8N8B7 351 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 PI4KAP1Q8N8J0 262 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 GBP7Q8N8V2 638 aaPredicted RBP4.21□□□□□ -1.74
MDM2-220ENST00000496959 TEKT1Q969V4 418 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 KLHL5Q96PQ7 755 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 ACTL8Q9H568 366 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 HACD3Q9P035 362 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 DOCK3Q8IZD9 2030 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 IL16Q14005 1332 aa4.21□□□□□ -1.74
MDM2-220ENST00000496959 LOC285556D6RIA3 1793 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 CUL9Q8IWT3 2517 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 IGLV4-3A0A075B6K6 122 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 IQCMA0A1B0GVH7 501 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 TRBC2A0A5B9 178 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 SHISA7A6NL88 538 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 SHISA9B4DS77 424 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 TRAFD1O14545 582 aaPredicted RBP4.2□□□□□ -1.74
MDM2-220ENST00000496959 CXCL11O14625 94 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 AP5Z1O43299 807 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 GPRIN2O60269 458 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 GALR3O60755 368 aaPredicted RBP4.2□□□□□ -1.74
MDM2-220ENST00000496959 FRAT2O75474 233 aaPredicted RBP4.2□□□□□ -1.74
MDM2-220ENST00000496959 NXPH4O95158 308 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 GSRP00390 522 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 CCL5P13501 91 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 GP9P14770 177 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 CYP11B2P19099 503 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 GCKRQ14397 625 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 C9orf152Q5JTZ5 239 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 SPECC1Q5M775 1068 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 C11orf53Q8IXP5 236 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 OR52B6Q8NGF0 335 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 ROBO4Q8WZ75 1007 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 PRO3102Q9H379 93 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 DNAJC4Q9NNZ3 241 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 TBC1D13Q9NVG8 400 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 NLGN3Q9NZ94 848 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.2□□□□□ -1.74
MDM2-220ENST00000496959 MYH2Q9UKX2 1941 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 ATAD5Q96QE3 1844 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 DDX60LQ5H9U9 1706 aaKnown RBP4.2□□□□□ -1.74
MDM2-220ENST00000496959 MROH5Q6ZUA9 1318 aa4.2□□□□□ -1.74
MDM2-220ENST00000496959 FRMPD3Q5JV73 1810 aa4.19□□□□□ -1.74
MDM2-220ENST00000496959 CCL24O00175 119 aa4.19□□□□□ -1.74
MDM2-220ENST00000496959 PDHXO00330 501 aa4.19□□□□□ -1.74
MDM2-220ENST00000496959 CYTIPO60759 359 aa4.19□□□□□ -1.74
MDM2-220ENST00000496959 HPP00738 406 aa4.19□□□□□ -1.74
MDM2-220ENST00000496959 IGKV5-2P06315 115 aa4.19□□□□□ -1.74
MDM2-220ENST00000496959 SFTPDP35247 375 aa4.19□□□□□ -1.74
MDM2-220ENST00000496959 HSD17B3P37058 310 aa4.19□□□□□ -1.74
MDM2-220ENST00000496959 CASP2P42575 452 aa4.19□□□□□ -1.74
MDM2-220ENST00000496959 ERVK-16P61578 105 aa4.19□□□□□ -1.74
MDM2-220ENST00000496959 RBPJQ06330 500 aa4.19□□□□□ -1.74
MDM2-220ENST00000496959 TWISTNBQ3B726 338 aaPredicted RBP4.19□□□□□ -1.74
MDM2-220ENST00000496959 LRIT3Q3SXY7 679 aa4.19□□□□□ -1.74
MDM2-220ENST00000496959 CYB5D1Q6P9G0 228 aa4.19□□□□□ -1.74
MDM2-220ENST00000496959 RNF130Q86XS8 419 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms