RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 IKBIPQ70UQ0 350 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 FAM9CQ8IZT9 166 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 SHISA5Q8N114 240 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 MIER2Q8N344 545 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 CDC26Q8NHZ8 85 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 ULBP3Q9BZM4 244 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 ZIM2Q9NZV7 527 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 WBP11Q9Y2W2 641 aaKnown RBP17.28■□□□□ 0.36
RGP1-202ENST00000496906 ATG4BQ9Y4P1 393 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 MAU2Q9Y6X3 613 aa17.28■□□□□ 0.36
RGP1-202ENST00000496906 PTPRBP23467 1997 aa17.27■□□□□ 0.36
RGP1-202ENST00000496906 C9orf172C9J069 976 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 GPX3P22352 226 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 JAK1P23458 1154 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 OR1D4P47884 311 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 UFM1P61960 85 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 MAT1AQ00266 395 aaKnown RBP17.27■□□□□ 0.35
RGP1-202ENST00000496906 KLC1Q07866 573 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 DSG2Q14126 1118 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 TERF2Q15554 542 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 FAM71E1Q6IPT2 247 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 PAOXQ6QHF9 649 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 GPR180Q86V85 440 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 TMEM132CQ8N3T6 1108 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 EFCAB3Q8N7B9 438 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.27■□□□□ 0.35
RGP1-202ENST00000496906 TEX37Q96LM6 180 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 LRFN5Q96NI6 719 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 ZNF304Q9HCX3 659 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 MRGBPQ9NV56 204 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 HCN3Q9P1Z3 774 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 PHF11Q9UIL8 331 aa17.27■□□□□ 0.35
RGP1-202ENST00000496906 SEC16AO15027 2179 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 A0A1W2PR48 441 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 PROM1O43490 865 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 CHST10O43529 356 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 GUCY1B2O75343 617 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 LRATO95237 230 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 RAB38P57729 211 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 C21orf58P58505 322 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 GABREP78334 506 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 SYT16Q17RD7 645 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 NDUFAF5Q5TEU4 345 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 TMEM164Q5U3C3 297 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 RIMKLAQ8IXN7 391 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 KRTCAP2Q8N6L1 136 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 OR9I1Q8NGQ6 314 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 GFM2Q969S9 779 aaKnown RBP17.26■□□□□ 0.35
RGP1-202ENST00000496906 LRRC37BQ96QE4 947 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 CSF3RQ99062 836 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 DPY30Q9C005 99 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 B3GNT4Q9C0J1 378 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 POLR1BQ9H9Y6 1135 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 MS4A12Q9NXJ0 267 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 ARMCX1Q9P291 453 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 EXO1Q9UQ84 846 aaKnown RBP17.26■□□□□ 0.35
RGP1-202ENST00000496906 MAP4K5Q9Y4K4 846 aa17.26■□□□□ 0.35
RGP1-202ENST00000496906 MEN1O00255 615 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 PRMT3O60678 531 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 TNFSF15O95150 251 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 AIFM1O95831 613 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 ONECUT2O95948 504 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 PRPS1L1P21108 318 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 FBLP22087 321 aaKnown RBP17.25■□□□□ 0.35
RGP1-202ENST00000496906 DCDP81605 110 aaKnown RBP17.25■□□□□ 0.35
RGP1-202ENST00000496906 SHC2P98077 582 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 MC1RQ01726 317 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 TNFRSF17Q02223 184 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 ABHD18Q0P651 414 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 HEPACAMQ14CZ8 416 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 ARHGAP40Q5TG30 622 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 DSELQ8IZU8 1212 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 MMP21Q8N119 569 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 COL26A1Q96A83 441 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 CCDC106Q9BWC9 280 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 FAIM2Q9BWQ8 316 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 SLC22A11Q9NSA0 550 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 FOXJ2Q9P0K8 574 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.25■□□□□ 0.35
RGP1-202ENST00000496906 FER1L5A0AVI2 2057 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 DCHS1Q96JQ0 3298 aa17.25■□□□□ 0.35
RGP1-202ENST00000496906 PSMD12O00232 456 aaPredicted RBP17.24■□□□□ 0.35
RGP1-202ENST00000496906 CYR61O00622 381 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 SCAMP2O15127 329 aaKnown RBP17.24■□□□□ 0.35
RGP1-202ENST00000496906 SLC22A2O15244 555 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 AKAP10O43572 662 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 SLC22A3O75751 556 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 STK17BO94768 372 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 NR2F6P10588 404 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 RNH1P13489 461 aaKnown RBP17.24■□□□□ 0.35
RGP1-202ENST00000496906 DDCP20711 480 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 CPN2P22792 545 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 IL12AP29459 219 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 ADSLP30566 484 aaPredicted RBP17.24■□□□□ 0.35
RGP1-202ENST00000496906 BUD31P41223 144 aaPredicted RBP17.24■□□□□ 0.35
RGP1-202ENST00000496906 GABPB1Q06547 395 aaPredicted RBP17.24■□□□□ 0.35
RGP1-202ENST00000496906 C2orf80Q0P641 193 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 NKAIN1Q4KMZ8 207 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 C18orf63Q68DL7 685 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 COX15Q7KZN9 410 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms