RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 DTX1Q86Y01 620 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 CACNA2D3Q8IZS8 1091 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 FCRL1Q96LA6 429 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 EBPLQ9BY08 206 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 AKIRIN1Q9H9L7 192 aaPredicted RBP20.56■□□□□ 0.88
C9orf3-222ENST00000496567 FBXW2Q9UKT8 454 aa20.56■□□□□ 0.88
C9orf3-222ENST00000496567 EIF3LQ9Y262 564 aaKnown RBP20.56■□□□□ 0.88
C9orf3-222ENST00000496567 A0A0G2JND7 137 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 XCR1P46094 333 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 RAB38P57729 211 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 ZNF763Q0D2J5 394 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 SYT16Q17RD7 645 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 MLIPQ5VWP3 458 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 LCN10Q6JVE6 187 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 OGFOD2Q6N063 350 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 CGB2Q6NT52 195 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 RFWD2Q8NHY2 731 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 OR1F2PQ96R84 312 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 MAPKAP1Q9BPZ7 522 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 CCDC28BQ9BUN5 200 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 FAM117AQ9C073 453 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 SLC26A1Q9H2B4 701 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 TCF7L2Q9NQB0 619 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 NOP53Q9NZM5 478 aaKnown RBP20.55■□□□□ 0.88
C9orf3-222ENST00000496567 KCMF1Q9P0J7 381 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 KLHL14Q9P2G3 628 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 WBP11Q9Y2W2 641 aaKnown RBP20.55■□□□□ 0.88
C9orf3-222ENST00000496567 ASB4Q9Y574 426 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 FER1L5A0AVI2 2057 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 IGLV3-12A0A075B6K2 115 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 SRRM3A6NNA2 597 aaPredicted RBP20.55■□□□□ 0.88
C9orf3-222ENST00000496567 DNAJB6O75190 326 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 PRPS2P11908 318 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 TLX1P31314 330 aaPredicted RBP20.55■□□□□ 0.88
C9orf3-222ENST00000496567 BUD31P41223 144 aaPredicted RBP20.55■□□□□ 0.88
C9orf3-222ENST00000496567 STAT5AP42229 794 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 FAM198BQ6UWH4 519 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 SPATA19Q7Z5L4 167 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 IL22RA1Q8N6P7 574 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 EFCAB3Q8N7B9 438 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 FGF11Q92914 225 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 NKD1Q969G9 470 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 TBC1D20Q96BZ9 403 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 PEX11GQ96HA9 241 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 OR52B2Q96RD2 323 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 EBF4Q9BQW3 602 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 TGIF2Q9GZN2 237 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 C14orf105Q9NVL8 296 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 ASIC5Q9NY37 505 aa20.55■□□□□ 0.88
C9orf3-222ENST00000496567 NXT1Q9UKK6 140 aaKnown RBP20.55■□□□□ 0.88
C9orf3-222ENST00000496567 MRPS33Q9Y291 106 aaKnown RBP20.55■□□□□ 0.88
C9orf3-222ENST00000496567 CACNA1AO00555 2505 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 SHOX2O60902 331 aaPredicted RBP20.54■□□□□ 0.88
C9orf3-222ENST00000496567 RAB40ALP0C0E4 278 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 PCSK2P16519 638 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 TCN2P20062 427 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 CPN2P22792 545 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 HNRNPH2P55795 449 aaKnown RBP20.54■□□□□ 0.88
C9orf3-222ENST00000496567 PCBP4P57723 403 aaKnown RBP20.54■□□□□ 0.88
C9orf3-222ENST00000496567 LSM12Q3MHD2 195 aaKnown RBP20.54■□□□□ 0.88
C9orf3-222ENST00000496567 IL23RQ5VWK5 629 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 MRPL14Q6P1L8 145 aaKnown RBP20.54■□□□□ 0.88
C9orf3-222ENST00000496567 C1orf50Q9BV19 199 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 EPN3Q9H201 632 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 WDR54Q9H977 334 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 WDR41Q9HAD4 459 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 KCNK13Q9HB14 408 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 DKK4Q9UBT3 224 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 CTSFQ9UBX1 484 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 DLGAP4Q9Y2H0 992 aa20.54■□□□□ 0.88
C9orf3-222ENST00000496567 BLACEA4D250 179 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 C21orf140B9A014 251 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 PROM1O43490 865 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 BCKDHAP12694 445 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 DRD4P21917 467 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 JAK1P23458 1154 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 ARFIP2P53365 341 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 NCF4Q15080 339 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 MED25Q71SY5 747 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 STT3BQ8TCJ2 826 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 C16orf78Q8WTQ4 265 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 CT55Q8WUE5 264 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 MIEF2Q96C03 454 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 TM4SF18Q96CE8 201 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 RILPQ96NA2 401 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 FAIM2Q9BWQ8 316 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 TMEM120AQ9BXJ8 343 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 FAM107BQ9H098 131 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 PADI2Q9Y2J8 665 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 ATG4BQ9Y4P1 393 aa20.53■□□□□ 0.88
C9orf3-222ENST00000496567 BMP10O95393 424 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 FHP07954 510 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 ZGLP1P0C6A0 271 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 SDC1P18827 310 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 ASMTP46597 345 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 TAS2R50P59544 299 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 RPS15P62841 145 aaKnown RBP20.52■□□□□ 0.88
C9orf3-222ENST00000496567 TNFRSF17Q02223 184 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 HEPACAMQ14CZ8 416 aa20.52■□□□□ 0.88
C9orf3-222ENST00000496567 NKG7Q16617 165 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms