RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 CENPKQ9BS16 269 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 TBCDQ9BTW9 1192 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 ADAP2Q9NPF8 381 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 PRTFDC1Q9NRG1 225 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 TSC22D4Q9Y3Q8 395 aa14.71□□□□□ -0.05
HDAC4-213ENST00000496347 TNPO3Q9Y5L0 923 aaKnown RBP14.71□□□□□ -0.05
HDAC4-213ENST00000496347 ITPR2Q14571 2701 aa14.71□□□□□ -0.06
HDAC4-213ENST00000496347 CYR61O00622 381 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 FCHO1O14526 889 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 MAN1A2O60476 641 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 MYO1DO94832 1006 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 STSP08842 583 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 CD46P15529 392 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 CD96P40200 585 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 PIK3CBP42338 1070 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 PHEXP78562 749 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 PFKFB4Q16877 469 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 RPS19BP1Q86WX3 136 aaKnown RBP14.7□□□□□ -0.06
HDAC4-213ENST00000496347 KIF2BQ8N4N8 673 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 APCDD1LQ8NCL9 501 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 OR7G3Q8NG95 312 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 KIF18AQ8NI77 898 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 IFT81Q8WYA0 676 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 REPS1Q96D71 796 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 CMTM7Q96FZ5 175 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 VMP1Q96GC9 406 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 GPR78Q96P69 363 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 SIGLEC12Q96PQ1 595 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 CSF3RQ99062 836 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 PAFAH2Q99487 392 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 ZNF180Q9UJW8 692 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 TMCO1Q9UM00 188 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 ANGPTL3Q9Y5C1 460 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 CLDN16Q9Y5I7 305 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 SPACA6W5XKT8 324 aa14.7□□□□□ -0.06
HDAC4-213ENST00000496347 TRBV11-1A0A0K0K1C0 115 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 KRT38O76015 456 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 NEURL1O76050 574 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 MLYCDO95822 493 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 PCNAP12004 261 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 HIST1H1TP22492 207 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-213ENST00000496347 TPP2P29144 1249 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-213ENST00000496347 EEF1DP29692 281 aaKnown RBP14.69□□□□□ -0.06
HDAC4-213ENST00000496347 TRHRP34981 398 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-213ENST00000496347 CLCN2P51788 898 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 HNRNPFP52597 415 aaKnown RBP14.69□□□□□ -0.06
HDAC4-213ENST00000496347 ARFIP1P53367 373 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 MLF1P58340 268 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 OC90Q02509 493 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-213ENST00000496347 PCBP2Q15366 365 aaKnown RBP eCLIP14.69□□□□□ -0.063e-7■■■■□ 25.1
HDAC4-213ENST00000496347 ELAVL1Q15717 326 aaKnown RBP14.69□□□□□ -0.06
HDAC4-213ENST00000496347 TSNAXIP1Q2TAA8 658 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.69□□□□□ -0.06
HDAC4-213ENST00000496347 TECRLQ5HYJ1 363 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 UBAP2Q5T6F2 1119 aaKnown RBP14.69□□□□□ -0.06
HDAC4-213ENST00000496347 KHDRBS2Q5VWX1 349 aaKnown RBP14.69□□□□□ -0.06
HDAC4-213ENST00000496347 LIPJQ5W064 366 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 ZNF793Q6ZN11 406 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 CHSY3Q70JA7 882 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 TEX9Q8N6V9 391 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 FAM98AQ8NCA5 519 aaKnown RBP14.69□□□□□ -0.06
HDAC4-213ENST00000496347 C7orf57Q8NEG2 295 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 F2RL3Q96RI0 385 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 DEFB126Q9BYW3 111 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 VPS11Q9H270 941 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 TRIM45Q9H8W5 580 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-213ENST00000496347 ACTR8Q9H981 624 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 PRM3Q9NNZ6 103 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 DMRT3Q9NQL9 472 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 PRDM7Q9NQW5 492 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 ANKRD10Q9NXR5 420 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 LRFN1Q9P244 771 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 OSGIN2Q9Y236 505 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 PCDHGA11Q9Y5H2 935 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 CELSR2Q9HCU4 2923 aa14.69□□□□□ -0.06
HDAC4-213ENST00000496347 A0A087WUV0 522 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-213ENST00000496347 A0A1B0GUH1 482 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 ASPDHA6ND91 283 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 H0YIV9 168 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 TGFBR3LH3BV60 316 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 SLC25A12O75746 678 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 ABHD2P08910 425 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 ATP5A1P25705 553 aaKnown RBP14.68□□□□□ -0.06
HDAC4-213ENST00000496347 SSR2P43308 183 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 CYB561P49447 251 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 GFRALQ6UXV0 394 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 MAMDC2Q7Z304 686 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-213ENST00000496347 UBE3DQ7Z6J8 389 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 MYLK4Q86YV6 388 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-213ENST00000496347 ACOT4Q8N9L9 421 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 TMEM52Q8NDY8 209 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 OR14A16Q8NHC5 309 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 HUS1BQ8NHY5 278 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 FRMD6Q96NE9 622 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 CDCP1Q9H5V8 836 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 PNO1Q9NRX1 252 aaKnown RBP14.68□□□□□ -0.06
HDAC4-213ENST00000496347 KCMF1Q9P0J7 381 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 MYO7BQ6PIF6 2116 aa14.68□□□□□ -0.06
HDAC4-213ENST00000496347 PCNX1Q96RV3 2341 aa14.67□□□□□ -0.06
HDAC4-213ENST00000496347 CROCCQ5TZA2 2017 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms