RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 DEPDC1Q5TB30 811 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 LETMD1Q6P1Q0 360 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 RIPOR1Q6ZS17 1223 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 SH2D5Q6ZV89 423 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 HPS6Q86YV9 775 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 TRPC4APQ8TEL6 797 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 PPP4R1Q8TF05 950 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 AENQ8WTP8 325 aaKnown RBP16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 SREK1Q8WXA9 508 aaKnown RBP16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 TM9SF4Q92544 642 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 TBCDQ9BTW9 1192 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 ZNF717Q9BY31 904 aaPredicted RBP16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 CLK4Q9HAZ1 481 aaKnown RBP16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 KCNK13Q9HB14 408 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 FARSBQ9NSD9 589 aaKnown RBP16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 KCMF1Q9P0J7 381 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 ZNF225Q9UK10 706 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 NTNG1Q9Y2I2 539 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 PCDHGA11Q9Y5H2 935 aa16.46■□□□□ 0.23
RHBDD3-207ENST00000496342 KLHL41O60662 606 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 UGDHO60701 494 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 LDB3O75112 727 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 EEDO75530 441 aaKnown RBP16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 OR4F21O95013 312 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 KRT15P19012 456 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 HIST1H1TP22492 207 aaPredicted RBP16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 SERPINB1P30740 379 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 PIK3CBP42338 1070 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 HNRNPH2P55795 449 aaKnown RBP16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 ARG2P78540 354 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 SLC13A2Q13183 592 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 AP5B1Q2VPB7 878 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 TMEM35AQ53FP2 167 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 ZNF678Q5SXM1 525 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 CHSY3Q70JA7 882 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 CRLF3Q8IUI8 442 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 C4orf33Q8N1A6 199 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 CISD2Q8N5K1 135 aaKnown RBP16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 EFCAB3Q8N7B9 438 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 DNAJB14Q8TBM8 379 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 ACMSDQ8TDX5 336 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 HBEGFQ99075 208 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 NTMT1Q9BV86 223 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 PNO1Q9NRX1 252 aaKnown RBP16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 MMACHCQ9Y4U1 282 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 PCDHGA10Q9Y5H3 936 aa16.45■□□□□ 0.22
RHBDD3-207ENST00000496342 TENM4Q6N022 2769 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 EML6Q6ZMW3 1958 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 TLDC2A0PJX2 215 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 SAGE2PA6NJ88 616 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 SUPT7LO94864 414 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 SCELO95171 688 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 WDPCPO95876 746 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 GBAP04062 536 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 TAC1P20366 129 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 HPDP32754 393 aaPredicted RBP16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 HERVK_113P63132 956 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 CLCQ05315 142 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 SRSF11Q05519 484 aaKnown RBP16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 TTC19Q6DKK2 380 aaPredicted RBP16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 OR4C11Q6IEV9 310 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 METTL2BQ6P1Q9 378 aaKnown RBP16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 MILR1Q7Z6M3 343 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 TDRPQ86YL5 185 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 BEST3Q8N1M1 668 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 NFAM1Q8NET5 270 aaPredicted RBP16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 UCN3Q969E3 161 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 ZBTB9Q96C00 473 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 SNRNP40Q96DI7 357 aaKnown RBP16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 C1QTNF3Q9BXJ4 246 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 ERVK-6Q9BXR3 956 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 MMP25Q9NPA2 562 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 ASF1BQ9NVP2 202 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 ANKRD10Q9NXR5 420 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 TSC22D4Q9Y3Q8 395 aa16.44■□□□□ 0.22
RHBDD3-207ENST00000496342 ARHGAP10A1A4S6 786 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 G3V2L1 256 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 TMPRSS11DO60235 418 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 GLRA3O75311 464 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 MYO1DO94832 1006 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 PROCP04070 461 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 GSTA1P08263 222 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 ICAM2P13598 275 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 CPN2P22792 545 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 ATP5F1P24539 256 aaPredicted RBP16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 BSGP35613 385 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 PHEXP78562 749 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 SLAMF1Q13291 335 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 ZNF169Q14929 603 aaPredicted RBP16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 EXT1Q16394 746 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 C18orf63Q68DL7 685 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 OR4N5Q8IXE1 308 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 IQCKQ8N0W5 287 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 SRFBP1Q8NEF9 429 aaKnown RBP16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 M1APQ8TC57 530 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 RGMAQ96B86 450 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 REPS1Q96D71 796 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 LMF1Q96S06 567 aa16.43■□□□□ 0.22
RHBDD3-207ENST00000496342 LYRM4Q9HD34 91 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms