RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 EXOC7Q9UPT5 735 aa3.22□□□□□ -1.89
CLK1-214ENST00000496205 ZNF510Q9Y2H8 683 aa3.22□□□□□ -1.89
CLK1-214ENST00000496205 CLCA3PQ9Y6N3 262 aa3.22□□□□□ -1.89
CLK1-214ENST00000496205 DHX29Q7Z478 1369 aaKnown RBP3.22□□□□□ -1.89
CLK1-214ENST00000496205 NOTCH2Q04721 2471 aa3.21□□□□□ -1.89
CLK1-214ENST00000496205 TMEM129A0AVI4 362 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 FAM149AA5PLN7 773 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 A8MVM7 634 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 GPR89AB7ZAQ6 455 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 ANHXE9PGG2 379 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 CACNB4O00305 520 aaPredicted RBP3.21□□□□□ -1.9
CLK1-214ENST00000496205 MAGEB2O15479 319 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 TSC22D2O75157 780 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 RAD51DO75771 328 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 KRT33AO76009 404 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 SNX4O95219 450 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 EML2O95834 649 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 VTNP04004 478 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 CHRNGP07510 517 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 GPR89BP0CG08 455 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 SFTPCP11686 197 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 ODC1P11926 461 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 KRT5P13647 590 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 AREGP15514 252 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 RPL35AP18077 110 aaKnown RBP3.21□□□□□ -1.9
CLK1-214ENST00000496205 AHCYP23526 432 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 RABIFP47224 123 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 IFNAR2P48551 515 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 TNFSF10P50591 281 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 PRKCEQ02156 737 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 CETN1Q12798 172 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 SCGB2A2Q13296 93 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 TSTA3Q13630 321 aaPredicted RBP3.21□□□□□ -1.9
CLK1-214ENST00000496205 ACKR1Q16570 336 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 LRRC37A5PQ49AS3 106 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 CCDC40Q4G0X9 1142 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 ADAMTSL4-AS1Q5T5F5 129 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 CES4AQ5XG92 561 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 TOM1L2Q6ZVM7 507 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 FCRLAQ7L513 359 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 TRMT11Q7Z4G4 463 aaKnown RBP3.21□□□□□ -1.9
CLK1-214ENST00000496205 CATSPERDQ86XM0 798 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 TMEM126BQ8IUX1 230 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 BATF2Q8N1L9 274 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 FAM89BQ8N5H3 189 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 TCEANCQ8N8B7 351 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 CTNNBL1Q8WYA6 563 aaPredicted RBP3.21□□□□□ -1.9
CLK1-214ENST00000496205 SHC3Q92529 594 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 SUSD6Q92537 303 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 SEPT8Q92599 483 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 F2RL3Q96RI0 385 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 TCHPQ9BT92 498 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 WWTR1Q9GZV5 400 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 CARD9Q9H257 536 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 RIBC2Q9H4K1 309 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 ZDHHC6Q9H6R6 413 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 MAGEF1Q9HAY2 307 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 SYTL2Q9HCH5 934 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 KCNMB3Q9NPA1 279 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 CGNQ9P2M7 1197 aaKnown RBP3.21□□□□□ -1.9
CLK1-214ENST00000496205 TRMT6Q9UJA5 497 aaKnown RBP3.21□□□□□ -1.9
CLK1-214ENST00000496205 PILRAQ9UKJ1 303 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 ELF5Q9UKW6 265 aaPredicted RBP3.21□□□□□ -1.9
CLK1-214ENST00000496205 SATB2Q9UPW6 733 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 NCKAP1Q9Y2A7 1128 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 EXOC6BQ9Y2D4 811 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 WDR37Q9Y2I8 494 aa3.21□□□□□ -1.9
CLK1-214ENST00000496205 STRAPQ9Y3F4 350 aaKnown RBP3.21□□□□□ -1.9
CLK1-214ENST00000496205 IGKV3D-15A0A087WSY6 115 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 A0A087WW49 117 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 A0A0G2JLW4 131 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 ARHGAP42A6NI28 874 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 CLDN3O15551 220 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 CYTIPO60759 359 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 IDH1O75874 414 aaKnown RBP3.2□□□□□ -1.9
CLK1-214ENST00000496205 CAVIN2O95810 425 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 IFNB1P01574 187 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 ETS1P14921 441 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 UGT1A6P19224 532 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 CHRNB4P30926 498 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 MDH1P40925 334 aaKnown RBP3.2□□□□□ -1.9
CLK1-214ENST00000496205 OPRL1P41146 370 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 MAGEA4P43358 317 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 CAMLGP49069 296 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 HNMTP50135 292 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 CLCN4P51793 760 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 NR0B1P51843 470 aaKnown RBP3.2□□□□□ -1.9
CLK1-214ENST00000496205 GFPT1Q06210 699 aaPredicted RBP3.2□□□□□ -1.9
CLK1-214ENST00000496205 GPR50Q13585 617 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 HNRNPDQ14103 355 aaKnown RBP3.2□□□□□ -1.9
CLK1-214ENST00000496205 STXBP2Q15833 593 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 LRRC23Q53EV4 343 aaPredicted RBP3.2□□□□□ -1.9
CLK1-214ENST00000496205 RIPPLY2Q5TAB7 128 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 PWWP2BQ6NUJ5 590 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 RGS9BPQ6ZS82 235 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 ELMOD2Q8IZ81 293 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 FBXW8Q8N3Y1 598 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 TEX26Q8N6G2 289 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 EXOC6Q8TAG9 804 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 SMPDL3AQ92484 453 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms