RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 NEURL3Q96EH8 262 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 PRAP1Q96NZ9 151 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 KCNC2Q96PR1 638 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 F2RL3Q96RI0 385 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 PIP5K1AQ99755 562 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 MENTQ9BUN1 341 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 ZNF717Q9BY31 904 aaPredicted RBP10.56□□□□□ -0.72
CMSS1-208ENST00000496116 RSPH9Q9H1X1 276 aaPredicted RBP10.56□□□□□ -0.72
CMSS1-208ENST00000496116 CXorf36Q9H7Y0 433 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 PALMDQ9NP74 551 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 AASSQ9UDR5 926 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 SH3GLB1Q9Y371 365 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 STON1Q9Y6Q2 735 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 COL4A3Q01955 1670 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 CHD7Q9P2D1 2997 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 RTCAO00442 366 aaKnown RBP10.55□□□□□ -0.72
CMSS1-208ENST00000496116 SH3BP5O60239 455 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 PFDN1O60925 122 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 GABARAPO95166 117 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 TBX6O95947 436 aaPredicted RBP10.55□□□□□ -0.72
CMSS1-208ENST00000496116 MT-ND2P03891 347 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 INHBBP09529 407 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 C5AR1P21730 350 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 GGT2P36268 569 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 ERVK-21P61565 698 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 DMPKQ09013 629 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 CLCA4Q14CN2 919 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 CTF1Q16619 201 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 SMN1Q16637 294 aaKnown RBP10.55□□□□□ -0.72
CMSS1-208ENST00000496116 PRSS53Q2L4Q9 553 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 EXOC3L2Q2M3D2 409 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 LAIR1Q6GTX8 287 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 CCDC71Q8IV32 467 aaPredicted RBP10.55□□□□□ -0.72
CMSS1-208ENST00000496116 DEPDC4Q8N2C3 294 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 SLC5A8Q8N695 610 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 TANKQ92844 425 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 RGMAQ96B86 450 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 HSPBAP1Q96EW2 488 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 PDXPQ96GD0 296 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 FERD3LQ96RJ6 166 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 EPS8L2Q9H6S3 715 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 NECTIN3Q9NQS3 549 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 PHPT1Q9NRX4 125 aaPredicted RBP10.55□□□□□ -0.72
CMSS1-208ENST00000496116 DZANK1Q9NVP4 752 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 ADAM29Q9UKF5 820 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 HCN2Q9UL51 889 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 RAB23Q9ULC3 237 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 ALPK3Q96L96 1907 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 TRBC2A0A5B9 178 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 FEZF1A0PJY2 475 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 OR1F1O43749 312 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 WBP4O75554 376 aaKnown RBP10.55□□□□□ -0.72
CMSS1-208ENST00000496116 PDE9AO76083 593 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 FADS2O95864 444 aaKnown RBP10.55□□□□□ -0.72
CMSS1-208ENST00000496116 IFNW1P05000 195 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 RHCEP18577 417 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 PSMB9P28065 219 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 PSMB5P28074 263 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 CD6P30203 668 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 TRIM23P36406 574 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 MAP2K4P45985 399 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 XCR1P46094 333 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 KCNC4Q03721 635 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 AQP6Q13520 282 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 SPCS2Q15005 226 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 SAXO2Q658L1 398 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 C16orf87Q6PH81 154 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 AHSA2Q719I0 299 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 ADCK2Q7Z695 626 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 P2RY8Q86VZ1 359 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 ADGRF3Q8IZF5 1079 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 MMP21Q8N119 569 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 HDDC3Q8N4P3 179 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 SMYD1Q8NB12 490 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 TTLQ8NG68 377 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 PHF10Q8WUB8 498 aaKnown RBP10.55□□□□□ -0.72
CMSS1-208ENST00000496116 APH1BQ8WW43 257 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 FCGR1BQ92637 280 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 ZBED6CLQ96FA7 236 aaPredicted RBP10.55□□□□□ -0.72
CMSS1-208ENST00000496116 ZNF764Q96H86 408 aaPredicted RBP10.55□□□□□ -0.72
CMSS1-208ENST00000496116 C12orf66Q96MD2 445 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 RAB11FIP5Q9BXF6 653 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 TMEM121BQ9BXQ6 578 aaPredicted RBP10.55□□□□□ -0.72
CMSS1-208ENST00000496116 OSGEPL1Q9H4B0 414 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 PREBQ9HCU5 417 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 ACOT13Q9NPJ3 140 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 MBNL1Q9NR56 388 aaKnown RBP10.55□□□□□ -0.72
CMSS1-208ENST00000496116 GALNT8Q9NY28 637 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 RNF6Q9Y252 685 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 ZNF451Q9Y4E5 1061 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 OR1A2Q9Y585 309 aa10.55□□□□□ -0.72
CMSS1-208ENST00000496116 hCG_2014768A0A024R1R8 64 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 PRAMEF33A0A0G2JMD5 474 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 A0A1W2PP55 124 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 A0A1W2PPV9 198 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 TMEM247A6NEH6 219 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 GRXCR1A8MXD5 290 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 NDUFS4O43181 175 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 PRAMEF10O60809 474 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 CCNB2O95067 398 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms