RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 IL20RBQ6UXL0 311 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 PACS1Q6VY07 963 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 KIAA0408Q6ZU52 694 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 FAM47EQ6ZV65 393 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 NLRC3Q7RTR2 1065 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 PRSS41Q7RTY9 318 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 LUZP2Q86TE4 346 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 SLC26A11Q86WA9 606 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 MEX3DQ86XN8 651 aaKnown RBP8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 ZNF441Q8N8Z8 693 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 ASZ1Q8WWH4 475 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 GAL3ST3Q96A11 431 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 NTNG2Q96CW9 530 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 PEX11GQ96HA9 241 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 SGCZQ96LD1 299 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 C19orf43Q9BQ61 176 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 TSSK1BQ9BXA7 367 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 MAK16Q9BXY0 300 aaKnown RBP8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 BHLHE41Q9C0J9 482 aaPredicted RBP8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 MYLK2Q9H1R3 596 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 ANKHQ9HCJ1 492 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 BRD7Q9NPI1 651 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 PSD3Q9NYI0 1048 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 SAMD15Q9P1V8 674 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 RSPH14Q9UHP6 348 aa8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 YARS2Q9Y2Z4 477 aaKnown RBP8.85□□□□□ -0.99
SMARCAL1-213ENST00000496037 ARHGAP21Q5T5U3 1957 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 NOTCH1P46531 2555 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 A0A1W2PPV9 198 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 ANKRD34BA5PLL1 514 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 DEFB108AA8MXU0 73 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 PRODHO43272 600 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 RDH16O75452 317 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 HTR3BO95264 441 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 CCNDBP1O95273 360 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 APOA4P06727 396 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 ZFXP17010 805 aaPredicted RBP8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 CNR1P21554 472 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 RPA3P35244 121 aaPredicted RBP8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 BDKRB1P46663 353 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 TSTA3Q13630 321 aaPredicted RBP8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 TMED2Q15363 201 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 SLC9A4Q6AI14 798 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 HIST2H2BDQ6DRA6 164 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 NPNTQ6UXI9 565 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 PID1Q7Z2X4 250 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 CAND1Q86VP6 1230 aaKnown RBP8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 VRK3Q8IV63 474 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 PIANPQ8IYJ0 282 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 SKA2Q8WVK7 121 aaPredicted RBP8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 TFB1MQ8WVM0 346 aaKnown RBP8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 DNAJC1Q96KC8 554 aaKnown RBP8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 CCDC77Q9BR77 488 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 WDR83Q9BRX9 315 aaKnown RBP8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 TMEM160Q9NX00 188 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 SPATA7Q9P0W8 599 aa8.84□□□□□ -0.99
SMARCAL1-213ENST00000496037 USF3Q68DE3 2245 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 A0A096LPE4 126 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 C15orf38-AP3S2A0A0A6YYH1 394 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 A0A1W2PPZ6 126 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 KDM4EB2RXH2 506 aaPredicted RBP8.83□□□□□ -1
SMARCAL1-213ENST00000496037 FHP07954 510 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 EGR1P18146 543 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 KDELR1P24390 212 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 IDUAP35475 653 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 CPOXP36551 454 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 MC3RP41968 323 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 DNASE1L1P49184 302 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 GEMP55040 296 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 WASHC5Q12768 1159 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 FOXO1Q12778 655 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 KRT31Q15323 416 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 NSUN5P2Q63ZY6 315 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 ZNF425Q6IV72 752 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 SUSD1Q6UWL2 747 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 RTL4Q6ZR62 310 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 IRF2BP2Q7Z5L9 587 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 RFX6Q8HWS3 928 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 PM20D2Q8IYS1 436 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 C1orf162Q8NEQ5 155 aaPredicted RBP8.83□□□□□ -1
SMARCAL1-213ENST00000496037 B3GNT7Q8NFL0 401 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 ZCCHC10Q8TBK6 192 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 MAGEC3Q8TD91 643 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 TBC1D20Q96BZ9 403 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 FOPNLQ96NB1 174 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 PTCHD1Q96NR3 888 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 VAT1Q99536 393 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 APOL2Q9BQE5 337 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 MED18Q9BUE0 208 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 SLC6A15Q9H2J7 730 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 LANCL2Q9NS86 450 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 SACM1LQ9NTJ5 587 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 TAC3Q9UHF0 121 aa8.83□□□□□ -1
SMARCAL1-213ENST00000496037 TTC7AQ9ULT0 858 aaPredicted RBP8.83□□□□□ -1
SMARCAL1-213ENST00000496037 DSCAMO60469 2012 aa8.82□□□□□ -1
SMARCAL1-213ENST00000496037 IGKV1-8A0A0C4DH67 115 aa8.82□□□□□ -1
SMARCAL1-213ENST00000496037 KRT87PA6NCN2 255 aa8.82□□□□□ -1
SMARCAL1-213ENST00000496037 ZNF860A6NHJ4 632 aa8.82□□□□□ -1
SMARCAL1-213ENST00000496037 H7C0S8 307 aa8.82□□□□□ -1
SMARCAL1-213ENST00000496037 UBFD1O14562 309 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms