RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	ERCC6L	Q2NKX8	1250 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	CCDC153	Q494R4	210 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	SFT2D3	Q587I9	215 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	OR4C11	Q6IEV9	310 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	ISLR2	Q6UXK2	745 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	LANCL3	Q6ZV70	420 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	MILR1	Q7Z6M3	343 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	ZNF595	Q8IYB9	648 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	CYP4X1	Q8N118	509 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	RIBC1	Q8N443	379 aa	Predicted RBP	11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	MREG	Q8N565	214 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	ACOT4	Q8N9L9	421 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	MYRIP	Q8NFW9	859 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	OR52B6	Q8NGF0	335 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	WDR20	Q8TBZ3	569 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	M1AP	Q8TC57	530 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	EPS8L3	Q8TE67	593 aa	Known RBP	11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	PPP4R1	Q8TF05	950 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	PSMF1	Q92530	271 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	PNPLA2	Q96AD5	504 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	MTERF1	Q99551	399 aa	Known RBP	11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	LPAR4	Q99677	370 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	WDR77	Q9BQA1	342 aa	Predicted RBP	11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	PARD6B	Q9BYG5	372 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	RBCK1	Q9BYM8	510 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	OR51B5	Q9H339	312 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	EPS8L2	Q9H6S3	715 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	MS4A12	Q9NXJ0	267 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	KCMF1	Q9P0J7	381 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	DAPP1	Q9UN19	280 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	B3GNT3	Q9Y2A9	372 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	STK38L	Q9Y2H1	464 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899	SPTA1	P02549	2419 aa		11.62	□□□□□ -0.55
MRPL55-233	ENST00000495899		A0A0G2JN53	185 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	TCRBV16S1A1N1	A0A5B0	115 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	CYR61	O00622	381 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	SEC24D	O94855	1032 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	KRT4	P19013	534 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	ARL1	P40616	181 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	RAP1GDS1	P52306	607 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	PRKAA2	P54646	552 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	LIM2	P55344	173 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	BTG2	P78543	158 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	TLE1	Q04724	770 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	IFFO1	Q0D2I5	559 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	TRAF3	Q13114	568 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	MFAP5	Q13361	173 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	DDX39B	Q13838	428 aa	Known RBP	11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	NADK2	Q4G0N4	442 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	ZNF678	Q5SXM1	525 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	FRG2	Q64ET8	278 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	SCUBE1	Q8IWY4	988 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	RDH11	Q8TC12	318 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	TSLP	Q969D9	159 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	L3HYPDH	Q96EM0	354 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	NSUN5	Q96P11	429 aa	Known RBP	11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	FRG2B	Q96QU4	278 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	SERPINI1	Q99574	410 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	EPN3	Q9H201	632 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	MMP25	Q9NPA2	562 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	SEMA4B	Q9NPR2	832 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	TEKT2	Q9UIF3	430 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	RAB21	Q9UL25	225 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899		V9GYY5	206 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	SPACA6	W5XKT8	324 aa		11.61	□□□□□ -0.55
MRPL55-233	ENST00000495899	IGHV3-20	A0A0C4DH32	117 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	TLDC2	A0PJX2	215 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	SMIM23	A6NLE4	172 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	COPE	O14579	308 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	CTNS	O60931	367 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	SUPT7L	O94864	414 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	SORBS2	O94875	1100 aa	Known RBP	11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	SEMA3D	O95025	777 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	MLYCD	O95822	493 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	MAOA	P21397	527 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	CERS1	P27544	350 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	SSR2	P43308	183 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	NEK2	P51955	445 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	CDH13	P55290	713 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	RPS13	P62277	151 aa	Known RBP	11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	CLC	Q05315	142 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	SLC18A2	Q05940	514 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	IFT88	Q13099	833 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	SLAMF1	Q13291	335 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	TERF2	Q15554	542 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	BTBD16	Q32M84	506 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	UNC50	Q53HI1	259 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	SLC6A19	Q695T7	634 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	TTC19	Q6DKK2	380 aa	Predicted RBP	11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	H3F3C	Q6NXT2	135 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	PAPD4	Q6PIY7	484 aa	Known RBP	11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	ZYG11A	Q6WRX3	759 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	ZNF793	Q6ZN11	406 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899		Q6ZS92	163 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	OR4F6	Q8NGB9	312 aa		11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	BRIX1	Q8TDN6	353 aa	Known RBP	11.6	□□□□□ -0.55
MRPL55-233	ENST00000495899	CDK15	Q96Q40	435 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms