RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327		A8MUI8	341 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	CLDN4	O14493	209 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	SIX3	O95343	332 aa	Predicted RBP	12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	HIST1H1T	P22492	207 aa	Predicted RBP	12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	HNRNPF	P52597	415 aa	Known RBP	12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	PHEX	P78562	749 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	DEPDC1	Q5TB30	811 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	FHL5	Q5TD97	284 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	LGSN	Q5TDP6	509 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	KHDRBS2	Q5VWX1	349 aa	Known RBP	12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	ADGRD1	Q6QNK2	874 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	TIFAB	Q6ZNK6	161 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	CHSY3	Q70JA7	882 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	LCA5	Q86VQ0	697 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	BEST3	Q8N1M1	668 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	ARMC10	Q8N2F6	343 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	L3MBTL4	Q8NA19	623 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	FAM47B	Q8NA70	645 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	TMEM52	Q8NDY8	209 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	HUS1B	Q8NHY5	278 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	SUN3	Q8TAQ9	357 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	GRHL3	Q8TE85	626 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	FAR1	Q8WVX9	515 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	REPS1	Q96D71	796 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	SLX1A	Q9BQ83	275 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	MRPL57	Q9BQC6	102 aa	Known RBP	12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	MRPL46	Q9H2W6	279 aa	Known RBP	12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	IPPK	Q9H8X2	491 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	KCMF1	Q9P0J7	381 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	PCTP	Q9UKL6	214 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	PPT2	Q9UMR5	302 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	PPIE	Q9UNP9	301 aa	Known RBP	12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	NBPF19	A0A087WUL8	3843 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	POLE	Q07864	2286 aa		12.48	□□□□□ -0.41
RBM28-208	ENST00000495327	ANKUB1	A6NFN9	424 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	TGFBR3L	H3BV60	316 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	PRAMEF2	O60811	474 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	SMIM24	O75264	130 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	F10	P00742	488 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	TGFB1	P01137	390 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	FAM153B	P0C7A2	387 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	MYBL2	P10244	700 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	EDN3	P14138	238 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	ATP5A1	P25705	553 aa	Known RBP	12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	EEF1D	P29692	281 aa	Known RBP	12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	SSR2	P43308	183 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	SLC13A2	Q13183	592 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	TUBA3C	Q13748	450 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	FAM153C	Q494X1	144 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	ZNF324B	Q6AW86	544 aa	Predicted RBP	12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	FCRLB	Q6BAA4	426 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	TUBA3E	Q6PEY2	450 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	MYLK4	Q86YV6	388 aa	Predicted RBP	12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	CYP4X1	Q8N118	509 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	KIF2B	Q8N4N8	673 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	BCORP1	Q8N888	145 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	ACOT4	Q8N9L9	421 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	APCDD1L	Q8NCL9	501 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	LRRN4CL	Q8ND94	238 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	MDS2	Q8NDY4	140 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	B3GNT7	Q8NFL0	401 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	WDR20	Q8TBZ3	569 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	PHF21B	Q96EK2	531 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	SCYL1	Q96KG9	808 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	MAGEB10	Q96LZ2	347 aa	Predicted RBP	12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	CENPK	Q9BS16	269 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	NTMT1	Q9BV86	223 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	EPB41L4B	Q9H329	900 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	ADAP2	Q9NPF8	381 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	PSD3	Q9NYI0	1048 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	SPACA6	W5XKT8	324 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	DOPEY1	Q5JWR5	2465 aa		12.47	□□□□□ -0.41
RBM28-208	ENST00000495327	SPTBN1	Q01082	2364 aa	Known RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	GABRR3	A8MPY1	467 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	RTCA	O00442	366 aa	Known RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	PLPP1	O14494	284 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	OR7A17	O14581	309 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	CTNS	O60931	367 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	MYO1D	O94832	1006 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	CLDN9	O95484	217 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	RPS17	P08708	135 aa	Known RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	SBK3	P0C264	359 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	TNFRSF8	P28908	595 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	TDGF1P3	P51864	188 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	TRAF3	Q13114	568 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	CUL3	Q13618	768 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	DDX39B	Q13838	428 aa	Known RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	ELOA	Q14241	798 aa	Known RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	ELAVL1	Q15717	326 aa	Known RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	EIF2S3L	Q2VIR3	472 aa	Known RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	AP5B1	Q2VPB7	878 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	GGTA1P	Q4G0N0	100 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	C10orf62	Q5T681	223 aa	Predicted RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	OR4C11	Q6IEV9	310 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	RPS19BP1	Q86WX3	136 aa	Known RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	ZCCHC7	Q8N3Z6	543 aa	Known RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	RNF175	Q8N4F7	328 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	C7orf57	Q8NEG2	295 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	RGMA	Q96B86	450 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms