RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CTSLP07711 333 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TBC1D3HP0C7X1 549 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 HNMTP50135 292 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 HYAL2Q12891 473 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 SYPL1Q16563 259 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 ZNF404Q494X3 552 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 FAM26DQ5JW98 314 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TBC1D3GQ6DHY5 549 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TBC1D3CQ6IPX1 549 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TRIM46Q7Z4K8 759 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.87□□□□□ -0.35
GPC1-209ENST00000495100 PTOV1Q86YD1 416 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 TBC1D3Q8IZP1 549 aaPredicted RBP12.87□□□□□ -0.35
GPC1-209ENST00000495100 B3GNT7Q8NFL0 401 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 NXPE3Q969Y0 559 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 NUS1Q96E22 293 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 ITPAQ9BY32 194 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 PALMDQ9NP74 551 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 CCL27Q9Y4X3 112 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 BACE2Q9Y5Z0 518 aa12.87□□□□□ -0.35
GPC1-209ENST00000495100 SPIN1Q9Y657 262 aaPredicted RBP12.87□□□□□ -0.35
GPC1-209ENST00000495100 TRBV4-1A0A0J9YWV2 114 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 ADAMDEC1O15204 470 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 CCNKO75909 580 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 SEC14L2O76054 403 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 C6P13671 934 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 TM4SF4P48230 202 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 CLDN2P57739 230 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 DSTNP60981 165 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 DCST1Q5T197 706 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 VN1R5Q7Z5H4 357 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 OR8K5Q8NH50 307 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 ZNF347Q96SE7 839 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 YIPF2Q9BWQ6 316 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 DSN1Q9H410 356 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 H7C0S8 307 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 SSX4O60224 188 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 ZNF821O75541 412 aaPredicted RBP12.86□□□□□ -0.35
GPC1-209ENST00000495100 NPPAP01160 153 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 TIE1P35590 1138 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 NCBP2P52298 156 aaKnown RBP eCLIP12.86□□□□□ -0.35
GPC1-209ENST00000495100 AP1S2P56377 157 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 ANXA8L1Q5VT79 327 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 FAM131AQ6UXB0 335 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 LIPIQ6XZB0 460 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 AMZ2Q86W34 360 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 PARGQ86W56 976 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 YAF2Q8IY57 180 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 SLC5A11Q8WWX8 675 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 IRAK3Q9Y616 596 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 SPTBN2O15020 2390 aa12.86□□□□□ -0.35
GPC1-209ENST00000495100 ANHXE9PGG2 379 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 ZW10O43264 779 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 PSIP1O75475 530 aaKnown RBP12.85□□□□□ -0.35
GPC1-209ENST00000495100 GASTP01350 101 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 RETP07949 1114 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 ZNF12P17014 697 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 MAPK9P45984 424 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 PTGES3Q15185 160 aaKnown RBP12.85□□□□□ -0.35
GPC1-209ENST00000495100 NNATQ16517 81 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 FCRLBQ6BAA4 426 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 ZC3H14Q6PJT7 736 aaKnown RBP12.85□□□□□ -0.35
GPC1-209ENST00000495100 C12orf40Q86WS4 652 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 USP7Q93009 1102 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 ISG20Q96AZ6 181 aaKnown RBP12.85□□□□□ -0.35
GPC1-209ENST00000495100 TMEM19Q96HH6 336 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 MGLLQ99685 303 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 REEP4Q9H6H4 257 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 CNIH4Q9P003 139 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 DNMT3BQ9UBC3 853 aaKnown RBP12.85□□□□□ -0.35
GPC1-209ENST00000495100 YARS2Q9Y2Z4 477 aaKnown RBP12.85□□□□□ -0.35
GPC1-209ENST00000495100 PTPN2P17706 415 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 KCNC4Q03721 635 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 ARHGEF6Q15052 776 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 PYDC2Q56P42 97 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 KLHDC8BQ8IXV7 354 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 SLAIN1Q8ND83 568 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.85□□□□□ -0.35
GPC1-209ENST00000495100 C16orf78Q8WTQ4 265 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 DIRAS2Q96HU8 199 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 TMED9Q9BVK6 235 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 CACYBPQ9HB71 228 aaKnown RBP12.85□□□□□ -0.35
GPC1-209ENST00000495100 NDUFAF4Q9P032 175 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 TBC1D14Q9P2M4 693 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 KNTC1P50748 2209 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 CHD5Q8TDI0 1954 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 UNCXA6NJT0 531 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 PRMT3O60678 531 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 ADAM23O75077 832 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 UGT2B17O75795 530 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 CEBPBP17676 345 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 IDSP22304 550 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 ASMTP46597 345 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 MTA1Q13330 715 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 DHCR24Q15392 516 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 INAVAQ3KP66 663 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 C5orf22Q49AR2 442 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 CRB2Q5IJ48 1285 aa12.85□□□□□ -0.35
GPC1-209ENST00000495100 SLC39A5Q6ZMH5 540 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms