RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	MAP7	Q14244	749 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	TERF2	Q15554	542 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	C3orf38	Q5JPI3	329 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	ARHGAP40	Q5TG30	622 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	TMEM198	Q66K66	360 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	OR52E8	Q6IFG1	317 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	MRM1	Q6IN84	353 aa	Known RBP	12.82	□□□□□ -0.36
APTX-231	ENST00000494973	MSANTD1	Q6ZTZ1	278 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	MTDH	Q86UE4	582 aa	Known RBP	12.82	□□□□□ -0.36
APTX-231	ENST00000494973	EFCAB3	Q8N7B9	438 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	OR9A4	Q8NGU2	314 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	COL26A1	Q96A83	441 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	FKBP10	Q96AY3	582 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	TSSK3	Q96PN8	268 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	NMUR2	Q9GZQ4	415 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	ZNF385D	Q9H6B1	395 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	REEP4	Q9H6H4	257 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	MKKS	Q9NPJ1	570 aa	Predicted RBP	12.82	□□□□□ -0.36
APTX-231	ENST00000494973	NXT1	Q9UKK6	140 aa	Known RBP	12.82	□□□□□ -0.36
APTX-231	ENST00000494973	SATB2	Q9UPW6	733 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973	KNTC1	P50748	2209 aa		12.82	□□□□□ -0.36
APTX-231	ENST00000494973		A0A0G2JN53	185 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	FAM234B	A2RU67	622 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	BBIP1	A8MTZ0	92 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	C4orf51	C9J302	202 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973		C9J4A7	227 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	SGK494	L7N484	410 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	CLDN4	O14493	209 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	SCAMP2	O15127	329 aa	Known RBP	12.81	□□□□□ -0.36
APTX-231	ENST00000494973	NVL	O15381	856 aa	Known RBP	12.81	□□□□□ -0.36
APTX-231	ENST00000494973	TMPRSS11D	O60235	418 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	RDH16	O75452	317 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	ALB	P02768	609 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	IL6	P05231	212 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	IL3	P08700	152 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	DDC	P20711	480 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	PRDX6	P30041	224 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	LIM2	P55344	173 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	BIK	Q13323	160 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	PTGR1	Q14914	329 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	NDUFAF5	Q5TEU4	345 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	FAM219B	Q5XKK7	198 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	FAM71E1	Q6IPT2	247 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	MED25	Q71SY5	747 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	CAMKMT	Q7Z624	323 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	PDSS2	Q86YH6	399 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	ZNF595	Q8IYB9	648 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	DSEL	Q8IZU8	1212 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	CA13	Q8N1Q1	262 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	VPS37A	Q8NEZ2	397 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	CDC26	Q8NHZ8	85 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
APTX-231	ENST00000494973	PPCDC	Q96CD2	204 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	ERP27	Q96DN0	273 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	CMTM5	Q96DZ9	223 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	GBP5	Q96PP8	586 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	TUBB6	Q9BUF5	446 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	SLC25A23	Q9BV35	468 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	SORBS1	Q9BX66	1292 aa	Known RBP	12.81	□□□□□ -0.36
APTX-231	ENST00000494973	NRSN2	Q9GZP1	204 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	MYLK2	Q9H1R3	596 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	DHCR7	Q9UBM7	475 aa	Known RBP	12.81	□□□□□ -0.36
APTX-231	ENST00000494973	G3BP2	Q9UN86	482 aa	Known RBP	12.81	□□□□□ -0.36
APTX-231	ENST00000494973	MRPS2	Q9Y399	296 aa	Known RBP	12.81	□□□□□ -0.36
APTX-231	ENST00000494973	ASB4	Q9Y574	426 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	PCDHGA7	Q9Y5G6	932 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	PCDHA9	Q9Y5H5	950 aa		12.81	□□□□□ -0.36
APTX-231	ENST00000494973	CFLAR	O15519	480 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	PROM1	O43490	865 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	CHST10	O43529	356 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	HYAL3	O43820	417 aa	Predicted RBP	12.8	□□□□□ -0.36
APTX-231	ENST00000494973	KIAA0754	O94854	1291 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	GBA	P04062	536 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	CTSB	P07858	339 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	CCNYL3	P0C7X3	344 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	COX7A2	P14406	83 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	ITIH1	P19827	911 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	GPX3	P22352	226 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	RORA	P35398	523 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	MNAT1	P51948	309 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	GABRE	P78334	506 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	OCA2	Q04671	838 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	ACTN3	Q08043	901 aa	Predicted RBP	12.8	□□□□□ -0.36
APTX-231	ENST00000494973	C2orf80	Q0P641	193 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	NKAIN1	Q4KMZ8	207 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	TRPM8	Q7Z2W7	1104 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	CLNK	Q7Z7G1	428 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	ESX1	Q8N693	406 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	ZFP28	Q8NHY6	868 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	TANK	Q92844	425 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	TBC1D20	Q96BZ9	403 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	TM4SF18	Q96CE8	201 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	NXPE2	Q96DL1	559 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	MARK4	Q96L34	752 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	CTRC	Q99895	268 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	PELO	Q9BRX2	385 aa	Known RBP	12.8	□□□□□ -0.36
APTX-231	ENST00000494973	CLMP	Q9H6B4	373 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	RMND5A	Q9H871	391 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	APMAP	Q9HDC9	416 aa		12.8	□□□□□ -0.36
APTX-231	ENST00000494973	ZNF282	Q9UDV7	671 aa	Predicted RBP	12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms