RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 RGMAQ96B86 450 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 CSF3RQ99062 836 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 ERVK-6Q9BXR3 956 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 ZNF717Q9BY31 904 aaPredicted RBP13.48□□□□□ -0.25
SCAP-213ENST00000494938 ROGDIQ9GZN7 287 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 LYRM4Q9HD34 91 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 B3GNT3Q9Y2A9 372 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 MMACHCQ9Y4U1 282 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 TLDC2A0PJX2 215 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 CTNSO60931 367 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 CDH16O75309 829 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 PROCP04070 461 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 KRT15P19012 456 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 HSD17B7P56937 341 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 SLC26A5P58743 744 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 FOXK1P85037 733 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 CLCQ05315 142 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 SLAMF1Q13291 335 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 CUL3Q13618 768 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 EXT1Q16394 746 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 BTBD16Q32M84 506 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 GGTA1PQ4G0N0 100 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 FRG2Q64ET8 278 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 LETMD1Q6P1Q0 360 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 CUZD1Q86UP6 607 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 ZNF595Q8IYB9 648 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 FAM47BQ8NA70 645 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 CATSPER1Q8NEC5 780 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 TM9SF4Q92544 642 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 REPS1Q96D71 796 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 TMEM237Q96Q45 408 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 FRG2BQ96QU4 278 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 LPAR4Q99677 370 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 C12orf65Q9H3J6 166 aaKnown RBP13.47□□□□□ -0.25
SCAP-213ENST00000494938 COPS7BQ9H9Q2 264 aaPredicted RBP13.47□□□□□ -0.25
SCAP-213ENST00000494938 MMP25Q9NPA2 562 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 PRTFDC1Q9NRG1 225 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 PLA2G3Q9NZ20 509 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 LUZP4Q9P127 313 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 RAB21Q9UL25 225 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 PPT2Q9UMR5 302 aa13.47□□□□□ -0.25
SCAP-213ENST00000494938 UBR5O95071 2799 aaPredicted RBP13.47□□□□□ -0.25
SCAP-213ENST00000494938 SCN3AQ9NY46 2000 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 TTLL8A6PVC2 850 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 A8MUA0 341 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 A8MUI8 341 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 CLDN4O14493 209 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 PLIN3O60664 434 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 EEDO75530 441 aaKnown RBP13.46□□□□□ -0.25
SCAP-213ENST00000494938 SUPT7LO94864 414 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 WISP1O95388 367 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 OTCP00480 354 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 KRT4P19013 534 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 PPP2R1BP30154 601 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 BSGP35613 385 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 TSFMP43897 325 aaKnown RBP13.46□□□□□ -0.25
SCAP-213ENST00000494938 CCT5P48643 541 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 ARFIP1P53367 373 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 MRM1Q6IN84 353 aaKnown RBP13.46□□□□□ -0.25
SCAP-213ENST00000494938 ZCCHC7Q8N3Z6 543 aaKnown RBP13.46□□□□□ -0.25
SCAP-213ENST00000494938 MYRIPQ8NFW9 859 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 DNAJB14Q8TBM8 379 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 ELP5Q8TE02 316 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 ADAMTS18Q8TE60 1221 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 PPP4R1Q8TF05 950 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 HAS2Q92819 552 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 MIB2Q96AX9 1013 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 L3HYPDHQ96EM0 354 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 NPAS2Q99743 824 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 ROPN1BQ9BZX4 212 aaPredicted RBP13.46□□□□□ -0.25
SCAP-213ENST00000494938 DDX31Q9H8H2 851 aaKnown RBP13.46□□□□□ -0.25
SCAP-213ENST00000494938 ROPN1Q9HAT0 212 aaPredicted RBP13.46□□□□□ -0.25
SCAP-213ENST00000494938 FARSBQ9NSD9 589 aaKnown RBP13.46□□□□□ -0.25
SCAP-213ENST00000494938 STMN3Q9NZ72 180 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 GRID1Q9ULK0 1009 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 PLAAQ9Y263 795 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 ASB4Q9Y574 426 aa13.46□□□□□ -0.25
SCAP-213ENST00000494938 MYOCOSA0A1B0GUC4 107 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 GLRA3O75311 464 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 SSR2P43308 183 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 GPR143P51810 404 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 AP2B1P63010 937 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 INPP5JQ15735 1006 aaPredicted RBP13.45□□□□□ -0.26
SCAP-213ENST00000494938 PRR30Q53SZ7 412 aaPredicted RBP13.45□□□□□ -0.26
SCAP-213ENST00000494938 SGO1Q5FBB7 561 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 FCRLBQ6BAA4 426 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 ZYG11AQ6WRX3 759 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 CLNKQ7Z7G1 428 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 SLC22A9Q8IVM8 553 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 C4orf33Q8N1A6 199 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 KIF2BQ8N4N8 673 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 MREGQ8N565 214 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 ARMC2Q8NEN0 867 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 ANKRD9Q96BM1 317 aaPredicted RBP13.45□□□□□ -0.26
SCAP-213ENST00000494938 C19orf60Q96EN9 201 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 SERPINI1Q99574 410 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 TMEM109Q9BVC6 243 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 GSTO2Q9H4Y5 243 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 EPS8L2Q9H6S3 715 aa13.45□□□□□ -0.26
SCAP-213ENST00000494938 PRM3Q9NNZ6 103 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms