RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 H3F3CQ6NXT2 135 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 FAM180AQ6UWF9 173 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 ACOT4Q8N9L9 421 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 OR51B5Q9H339 312 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 DMRT3Q9NQL9 472 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 NECTIN3Q9NQS3 549 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 ASF1BQ9NVP2 202 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 MS4A12Q9NXJ0 267 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 PCTPQ9UKL6 214 aa16.54■□□□□ 0.24
HDAC4-211ENST00000494800 SAP18O00422 153 aaKnown RBP16.53■□□□□ 0.24
HDAC4-211ENST00000494800 CDK2AP1O14519 115 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 SH3BGRLO75368 114 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 GSTA1P08263 222 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 STX4Q12846 297 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 INAQ16352 499 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 RPUSD3Q6P087 351 aaKnown RBP16.53■□□□□ 0.24
HDAC4-211ENST00000494800 SCUBE1Q8IWY4 988 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 LGI4Q8N135 537 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 HORMAD2Q8N7B1 307 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 CATSPER1Q8NEC5 780 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 C19orf60Q96EN9 201 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 NTMT1Q9BV86 223 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 PNO1Q9NRX1 252 aaKnown RBP16.53■□□□□ 0.24
HDAC4-211ENST00000494800 PSD3Q9NYI0 1048 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 TBK1Q9UHD2 729 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 RNF11Q9Y3C5 154 aa16.53■□□□□ 0.24
HDAC4-211ENST00000494800 UBR5O95071 2799 aaPredicted RBP16.52■□□□□ 0.24
HDAC4-211ENST00000494800 A8MUA0 341 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 FOXE1O00358 373 aaPredicted RBP16.52■□□□□ 0.24
HDAC4-211ENST00000494800 RTCAO00442 366 aaKnown RBP16.52■□□□□ 0.24
HDAC4-211ENST00000494800 CYR61O00622 381 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 OR7A17O14581 309 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 CTNSO60931 367 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 MYO1DO94832 1006 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 SCELO95171 688 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 OTCP00480 354 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 IFNA16P05015 189 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 GNLYP22749 145 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 CPN2P22792 545 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 TLX1P31314 330 aaPredicted RBP16.52■□□□□ 0.24
HDAC4-211ENST00000494800 RPS13P62277 151 aaKnown RBP16.52■□□□□ 0.24
HDAC4-211ENST00000494800 IFT88Q13099 833 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 CUL3Q13618 768 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 SERTAD2Q14140 314 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 ZRSR2Q15696 482 aaKnown RBP16.52■□□□□ 0.24
HDAC4-211ENST00000494800 UBE3DQ7Z6J8 389 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 MILR1Q7Z6M3 343 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 CRLF3Q8IUI8 442 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 B3GNT7Q8NFL0 401 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 ELP5Q8TE02 316 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 UTP23Q9BRU9 249 aaKnown RBP16.52■□□□□ 0.24
HDAC4-211ENST00000494800 ADAP2Q9NPF8 381 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 SEMA4BQ9NPR2 832 aaPredicted RBP16.52■□□□□ 0.24
HDAC4-211ENST00000494800 DCDC2Q9UHG0 476 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 PHF11Q9UIL8 331 aa16.52■□□□□ 0.24
HDAC4-211ENST00000494800 A8MT66 165 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 TCP11X1B4DZS4 312 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 PRAMEF2O60811 474 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 F10P00742 488 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 RPS17P08708 135 aaKnown RBP16.51■□□□□ 0.23
HDAC4-211ENST00000494800 PPP2R1BP30154 601 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 BUD31P41223 144 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-211ENST00000494800 CLCN2P51788 898 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 SLAMF1Q13291 335 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 ELAVL1Q15717 326 aaKnown RBP16.51■□□□□ 0.23
HDAC4-211ENST00000494800 FRG2Q64ET8 278 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 FCRLBQ6BAA4 426 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 ZNF793Q6ZN11 406 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 CLNKQ7Z7G1 428 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 RPS19BP1Q86WX3 136 aaKnown RBP16.51■□□□□ 0.23
HDAC4-211ENST00000494800 SLC22A9Q8IVM8 553 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 BEST3Q8N1M1 668 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 TMEM132CQ8N3T6 1108 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 ZCCHC7Q8N3Z6 543 aaKnown RBP16.51■□□□□ 0.23
HDAC4-211ENST00000494800 FAM26EQ8N5C1 309 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 BCORP1Q8N888 145 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 OR52B6Q8NGF0 335 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 DAZLQ92904 295 aaKnown RBP16.51■□□□□ 0.23
HDAC4-211ENST00000494800 CDK15Q96Q40 435 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 FRG2BQ96QU4 278 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 CSF3RQ99062 836 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 SERPINI1Q99574 410 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 MAPKAP1Q9BPZ7 522 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 DEFB126Q9BYW3 111 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 EPB41L4BQ9H329 900 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 ELOVL6Q9H5J4 265 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 AHSPQ9NZD4 102 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 TMEM216Q9P0N5 145 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 FBXW2Q9UKT8 454 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 PPT2Q9UMR5 302 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 CLCA3PQ9Y6N3 262 aa16.51■□□□□ 0.23
HDAC4-211ENST00000494800 GOLGA8RI6L899 631 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 PLPP1O14494 284 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 FCHO1O14526 889 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 PYGBP11216 843 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 KRT15P19012 456 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 UQCRFS1P47985 274 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 HNRNPFP52597 415 aaKnown RBP16.5■□□□□ 0.23
HDAC4-211ENST00000494800 HERVK_113P63132 956 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 OC90Q02509 493 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms