RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 REEP3Q6NUK4 255 aa11□□□□□ -0.65
RFC4-214ENST00000494047 LCTLQ6UWM7 567 aa11□□□□□ -0.65
RFC4-214ENST00000494047 VTCN1Q7Z7D3 282 aa11□□□□□ -0.65
RFC4-214ENST00000494047 OR2A12Q8NGT7 310 aa11□□□□□ -0.65
RFC4-214ENST00000494047 OR9A1PQ8NGU1 263 aa11□□□□□ -0.65
RFC4-214ENST00000494047 PUM2Q8TB72 1066 aaKnown RBP eCLIP11□□□□□ -0.65
RFC4-214ENST00000494047 APH1BQ8WW43 257 aa11□□□□□ -0.65
RFC4-214ENST00000494047 SLC5A11Q8WWX8 675 aa11□□□□□ -0.65
RFC4-214ENST00000494047 PYCR2Q96C36 320 aa11□□□□□ -0.65
RFC4-214ENST00000494047 EGLN2Q96KS0 407 aa11□□□□□ -0.65
RFC4-214ENST00000494047 NECTIN4Q96NY8 510 aa11□□□□□ -0.65
RFC4-214ENST00000494047 TRNT1Q96Q11 434 aaKnown RBP11□□□□□ -0.65
RFC4-214ENST00000494047 ZNF607Q96SK3 696 aa11□□□□□ -0.65
RFC4-214ENST00000494047 MTERF1Q99551 399 aaKnown RBP11□□□□□ -0.65
RFC4-214ENST00000494047 ATG10Q9H0Y0 220 aa11□□□□□ -0.65
RFC4-214ENST00000494047 NT5DC2Q9H857 520 aa11□□□□□ -0.65
RFC4-214ENST00000494047 PELI2Q9HAT8 420 aa11□□□□□ -0.65
RFC4-214ENST00000494047 A4GALTQ9NPC4 353 aa11□□□□□ -0.65
RFC4-214ENST00000494047 MIEF1Q9NQG6 463 aa11□□□□□ -0.65
RFC4-214ENST00000494047 KCND3Q9UK17 655 aa11□□□□□ -0.65
RFC4-214ENST00000494047 ADAM29Q9UKF5 820 aa11□□□□□ -0.65
RFC4-214ENST00000494047 STUB1Q9UNE7 303 aa11□□□□□ -0.65
RFC4-214ENST00000494047 TRAPPC4Q9Y296 219 aa11□□□□□ -0.65
RFC4-214ENST00000494047 GRIP1Q9Y3R0 1128 aa11□□□□□ -0.65
RFC4-214ENST00000494047 TESMINQ9Y4I5 508 aa11□□□□□ -0.65
RFC4-214ENST00000494047 PCDHGA2Q9Y5H1 932 aa11□□□□□ -0.65
RFC4-214ENST00000494047 PIPSLA2A3N6 862 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 PDZK1P1A8MUH7 402 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 GPR89AB7ZAQ6 455 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 BOLA2-SMG1P6H3BVE0 249 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 FAAHO00519 579 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 ASNA1O43681 348 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 C1orf105O95561 183 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 POU2F2P09086 479 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 GPR89BP0CG08 455 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 ENDOUP21128 410 aaKnown RBP10.99□□□□□ -0.65
RFC4-214ENST00000494047 PPP2R1BP30154 601 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 MMP12P39900 470 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 MAP2K4P45985 399 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 LIMS1P48059 325 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 MAPK10P53779 464 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 UGT2B15P54855 530 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 DSTNP60981 165 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 TBPL1P62380 186 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 RAE1P78406 368 aaKnown RBP10.99□□□□□ -0.65
RFC4-214ENST00000494047 ALDH6A1Q02252 535 aaKnown RBP10.99□□□□□ -0.65
RFC4-214ENST00000494047 RUNX1T1Q06455 604 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 RIPPLY1Q0D2K3 151 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 TMEM115Q12893 351 aaPredicted RBP10.99□□□□□ -0.65
RFC4-214ENST00000494047 DDX39BQ13838 428 aaKnown RBP10.99□□□□□ -0.65
RFC4-214ENST00000494047 MLC1Q15049 377 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 PTPRRQ15256 657 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 CCDC92Q53HC0 331 aaPredicted RBP10.99□□□□□ -0.65
RFC4-214ENST00000494047 TMEM201Q5SNT2 666 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 TPRG1LQ5T0D9 272 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 PRAMEF8Q5VWM4 474 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 PRAMEF7Q5VXH5 474 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 SLX4IPQ5VYV7 408 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 FAM71E1Q6IPT2 247 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 BHLHB9Q6PI77 547 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 ANGPTL8Q6UXH0 198 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 GAREM2Q75VX8 874 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 ZNF551Q7Z340 670 aaPredicted RBP10.99□□□□□ -0.65
RFC4-214ENST00000494047 COMMD6Q7Z4G1 85 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 TECPR1Q7Z6L1 1165 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 TMPRSS11BQ86T26 416 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 AKAP14Q86UN6 197 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 FAM124AQ86V42 546 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 SYTL1Q8IYJ3 562 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 CLECL1Q8IZS7 167 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 TTLQ8NG68 377 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 CDC26Q8NHZ8 85 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 OR5P2Q8WZ92 322 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 IRF7Q92985 503 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 RAD51AP1Q96B01 352 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 AP2M1Q96CW1 435 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 CCDC97Q96F63 343 aaPredicted RBP10.99□□□□□ -0.65
RFC4-214ENST00000494047 SLC22A12Q96S37 553 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 FEVQ99581 238 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 BBS2Q9BXC9 721 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 C1GALT1Q9NS00 363 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 KLHL3Q9UH77 587 aa10.99□□□□□ -0.65
RFC4-214ENST00000494047 RPL36Q9Y3U8 105 aaKnown RBP10.99□□□□□ -0.65
RFC4-214ENST00000494047 DNMT3AQ9Y6K1 912 aaPredicted RBP10.99□□□□□ -0.65
RFC4-214ENST00000494047 MTCL1Q9Y4B5 1905 aaKnown RBP10.99□□□□□ -0.65
RFC4-214ENST00000494047 A0A1W2PRB8 838 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 C19orf67A6NJJ6 358 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 ZAR1LA6NP61 321 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 HAT1O14929 419 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 TEX28O15482 410 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 AQP9O43315 295 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 TSPAN6O43657 245 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 SLITRK5O94991 958 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 SLC16A8O95907 504 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 C8AP07357 584 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 TRAPPC2P0DI81 140 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 TRAPPC2BP0DI82 140 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 ADORA3P0DMS8 318 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 GABRB1P18505 474 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 CD22P20273 847 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms