RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 GPR180Q86V85 440 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 BPHLQ86WA6 291 aaPredicted RBP18.32■□□□□ 0.52
USP39-218ENST00000493829 TM4SF18Q96CE8 201 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 PEX11GQ96HA9 241 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 MYLK2Q9H1R3 596 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 LYARQ9NX58 379 aaKnown RBP18.32■□□□□ 0.52
USP39-218ENST00000493829 CCDC167Q9P0B6 97 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 C5AR2Q9P296 337 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 ASB4Q9Y574 426 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 CNOT1A5YKK6 2376 aaKnown RBP18.32■□□□□ 0.52
USP39-218ENST00000493829 A0A1W2PR48 441 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 NR5A2O00482 541 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 ANKRD28O15084 1053 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 CHST10O43529 356 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 AIFM1O95831 613 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 FBLP22087 321 aaKnown RBP18.31■□□□□ 0.52
USP39-218ENST00000493829 CPN2P22792 545 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 ATP4BP51164 291 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 GABREP78334 506 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 GABPB1Q06547 395 aaPredicted RBP18.31■□□□□ 0.52
USP39-218ENST00000493829 KLC1Q07866 573 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 NDUFAF5Q5TEU4 345 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 YOD1Q5VVQ6 348 aaPredicted RBP18.31■□□□□ 0.52
USP39-218ENST00000493829 MRM1Q6IN84 353 aaKnown RBP18.31■□□□□ 0.52
USP39-218ENST00000493829 GK5Q6ZS86 529 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 CLNKQ7Z7G1 428 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 GALNT15Q8N3T1 639 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 TAAR9Q96RI9 348 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 FOXJ2Q9P0K8 574 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 DAPP1Q9UN19 280 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 CAPN7Q9Y6W3 813 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 C9orf172C9J069 976 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 FAM227AF5H4B4 570 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 SLC22A3O75751 556 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 CDC123O75794 336 aaPredicted RBP18.31■□□□□ 0.52
USP39-218ENST00000493829 TNFSF15O95150 251 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 PIK3R1P27986 724 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 IL12AP29459 219 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 HPCAL1P37235 193 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 ASMTP46597 345 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 TNFRSF17Q02223 184 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 KLF10Q13118 480 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 FAM180BQ6P0A1 224 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 PARP9Q8IXQ6 854 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 CPSF7Q8N684 471 aaKnown RBP18.31■□□□□ 0.52
USP39-218ENST00000493829 FITM2Q8N6M3 262 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 PROKR1Q8TCW9 393 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 GBP5Q96PP8 586 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 ZNF304Q9HCX3 659 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 MIEF1Q9NQG6 463 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 PHF11Q9UIL8 331 aa18.31■□□□□ 0.52
USP39-218ENST00000493829 WASHC1A8K0Z3 465 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 H0YIG0 161 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 NR2F6P10588 404 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 COX7A2P14406 83 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 PLA2G5P39877 138 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 CLDN8P56748 225 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 FOXC1Q12948 553 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 PGS1Q32NB8 556 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 FAM71E1Q6IPT2 247 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 TMPRSS7Q7RTY8 843 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 TREML1Q86YW5 311 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 DSELQ8IZU8 1212 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 GALNT6Q8NCL4 622 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 OR7A2PQ8NGA2 310 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 MVB12AQ96EY5 273 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 ZBTB18Q99592 522 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 DDA1Q9BW61 102 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 CCDC106Q9BWC9 280 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 LYRM4Q9HD34 91 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 ZIM2Q9NZV7 527 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 KCMF1Q9P0J7 381 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 TRPC4Q9UBN4 977 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 CDC14AQ9UNH5 594 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 EXO1Q9UQ84 846 aaKnown RBP18.3■□□□□ 0.52
USP39-218ENST00000493829 FER1L5A0AVI2 2057 aa18.3■□□□□ 0.52
USP39-218ENST00000493829 SCAMP2O15127 329 aaKnown RBP18.29■□□□□ 0.52
USP39-218ENST00000493829 STK17BO94768 372 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 HBQ1P09105 142 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 XCR1P46094 333 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 HNRNPFP52597 415 aaKnown RBP18.29■□□□□ 0.52
USP39-218ENST00000493829 RAB38P57729 211 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 TRA2BP62995 288 aaKnown RBP18.29■□□□□ 0.52
USP39-218ENST00000493829 DSG2Q14126 1118 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 ERV3-1Q14264 604 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 NIPAL1Q6NVV3 410 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 PRMT9Q6P2P2 845 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 IKBIPQ70UQ0 350 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 TICAM1Q8IUC6 712 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 PRSS58Q8IYP2 241 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 TMEM52Q8NDY8 209 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 OR51Q1Q8NH59 317 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.29■□□□□ 0.52
USP39-218ENST00000493829 FAIM2Q9BWQ8 316 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 NPLQ9BXD5 320 aaPredicted RBP18.29■□□□□ 0.52
USP39-218ENST00000493829 ASPSCR1Q9BZE9 553 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 SPACA6W5XKT8 324 aa18.29■□□□□ 0.52
USP39-218ENST00000493829 PROM1O43490 865 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 GUCY1B2O75343 617 aa18.28■□□□□ 0.52
USP39-218ENST00000493829 JRKO75564 520 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms