RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 NCKAP1Q9Y2A7 1128 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 POMT1Q9Y6A1 747 aa3.27□□□□□ -1.89
ITGB1-216ENST00000493758 UMODL1Q5DID0 1318 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 ZNF318Q5VUA4 2279 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 IGLV3-10A0A075B6K4 115 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 SRRM4A7MD48 611 aaKnown RBP3.26□□□□□ -1.89
ITGB1-216ENST00000493758 CCSO14618 274 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 PHOX2AO14813 284 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 PHF1O43189 567 aaPredicted RBP3.26□□□□□ -1.89
ITGB1-216ENST00000493758 CSDE1O75534 798 aaKnown RBP3.26□□□□□ -1.89
ITGB1-216ENST00000493758 SEMA4FO95754 770 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 HSPA4LO95757 839 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 MELTFP08582 738 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 CD1DP15813 335 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 ACKR3P25106 362 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 FRKP42685 505 aaPredicted RBP3.26□□□□□ -1.89
ITGB1-216ENST00000493758 SLC1A6P48664 564 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 SLC3A1Q07837 685 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 BFSP1Q12934 665 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 ZNF506Q5JVG8 444 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 MPP7Q5T2T1 576 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 LINC00242Q5T6M2 205 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 NHLRC1Q6VVB1 395 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 RFPL4BQ6ZWI9 263 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 NUFIP2Q7Z417 695 aaKnown RBP3.26□□□□□ -1.89
ITGB1-216ENST00000493758 ZNF444Q8N0Y2 327 aaPredicted RBP3.26□□□□□ -1.89
ITGB1-216ENST00000493758 GPD1LQ8N335 351 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 FLVCR1-AS1Q8TAF5 88 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 BSCL2Q96G97 398 aaPredicted RBP3.26□□□□□ -1.89
ITGB1-216ENST00000493758 C17orf62Q9BQA9 187 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 S100A14Q9HCY8 104 aa3.26□□□□□ -1.89
ITGB1-216ENST00000493758 LEF1Q9UJU2 399 aaPredicted RBP3.26□□□□□ -1.89
ITGB1-216ENST00000493758 MRPL11Q9Y3B7 192 aaKnown RBP3.26□□□□□ -1.89
ITGB1-216ENST00000493758 HBS1LQ9Y450 684 aaKnown RBP3.26□□□□□ -1.89
ITGB1-216ENST00000493758 IGKV6D-41A0A0C4DH26 115 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 SDR42E2A6NKP2 422 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 KLLNB2CW77 178 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 FBP2O00757 339 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 CCND3P30281 292 aaPredicted RBP3.25□□□□□ -1.89
ITGB1-216ENST00000493758 SLC1A4P43007 532 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 CCR4P51679 360 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 FAM133BQ5BKY9 247 aaKnown RBP3.25□□□□□ -1.89
ITGB1-216ENST00000493758 AGAP6Q5VW22 663 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 PM20D1Q6GTS8 502 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 NEPROQ6NW34 567 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 EMBQ6PCB8 327 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 REG3GQ6UW15 175 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 CYP4V2Q6ZWL3 525 aaPredicted RBP3.25□□□□□ -1.89
ITGB1-216ENST00000493758 VSIG1Q86XK7 387 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 BANPQ8N9N5 519 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 OR4Q3Q8NH05 313 aa3.25□□□□□ -1.89
ITGB1-216ENST00000493758 CITED2Q99967 270 aaPredicted RBP3.25□□□□□ -1.89
ITGB1-216ENST00000493758 IGLON5A6NGN9 336 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 RPL37AP8A6NKH3 93 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 ZNF724A8MTY0 619 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 MT-ND1P03886 318 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 SUPT20HL2P0C7V6 817 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 FHITP49789 147 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 PTK6Q13882 451 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 MEF2DQ14814 521 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 PCK2Q16822 640 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 ECSCRQ19T08 205 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 Q1RN00 199 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 ZNF789Q5FWF6 425 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 UTF1Q5T230 341 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 VITQ6UXI7 678 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 Q71RC1 249 aaPredicted RBP3.24□□□□□ -1.89
ITGB1-216ENST00000493758 SERINC5Q86VE9 423 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 TBC1D10CQ8IV04 446 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 ZNF584Q8IVC4 421 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 ABCA7Q8IZY2 2146 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 RTL3Q8N8U3 475 aaKnown RBP3.24□□□□□ -1.89
ITGB1-216ENST00000493758 NHLRC2Q8NBF2 726 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 BEST4Q8NFU0 473 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.24□□□□□ -1.89
ITGB1-216ENST00000493758 AGAP11Q8TF27 550 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 SEPT8Q92599 483 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 EXOC4Q96A65 974 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 RCHY1Q96PM5 261 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 ZDHHC6Q9H6R6 413 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 SP140LQ9H930 580 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 RAB9BQ9NP90 201 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 VPS18Q9P253 973 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 NIP7Q9Y221 180 aaKnown RBP eCLIP3.24□□□□□ -1.89
ITGB1-216ENST00000493758 FER1L5A0AVI2 2057 aa3.24□□□□□ -1.89
ITGB1-216ENST00000493758 A0A1B0GTH9 108 aa3.23□□□□□ -1.89
ITGB1-216ENST00000493758 A0A1W2PQ72 361 aa3.23□□□□□ -1.89
ITGB1-216ENST00000493758 FAM149AA5PLN7 773 aa3.23□□□□□ -1.89
ITGB1-216ENST00000493758 FOXI3A8MTJ6 420 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-216ENST00000493758 CTDSPLO15194 276 aa3.23□□□□□ -1.89
ITGB1-216ENST00000493758 ST8SIA3O43173 380 aa3.23□□□□□ -1.89
ITGB1-216ENST00000493758 LETM1O95202 739 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-216ENST00000493758 FAM200BP0CF97 657 aa3.23□□□□□ -1.89
ITGB1-216ENST00000493758 RPL34P49207 117 aaKnown RBP3.23□□□□□ -1.89
ITGB1-216ENST00000493758 FKBP1BP68106 108 aa3.23□□□□□ -1.89
ITGB1-216ENST00000493758 RBBP4Q09028 425 aa3.23□□□□□ -1.89
ITGB1-216ENST00000493758 ABRQ12979 859 aa3.23□□□□□ -1.89
ITGB1-216ENST00000493758 MEP1BQ16820 701 aa3.23□□□□□ -1.89
ITGB1-216ENST00000493758 TYSND1Q2T9J0 566 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms