RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	PLOD1	Q02809	727 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	LGALS3BP	Q08380	585 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	PPID	Q08752	370 aa	Known RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	GAB1	Q13480	694 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	NAA25	Q14CX7	972 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	IQCB1	Q15051	598 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	SLC14A2	Q15849	920 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	NRF1	Q16656	503 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	TEX44	Q53QW1	395 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	DNAJC21	Q5F1R6	531 aa	Known RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	SUSD1	Q6UWL2	747 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	SNX20	Q7Z614	316 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	C1QL4	Q86Z23	238 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	CCDC170	Q8IYT3	715 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	RAB42	Q8N4Z0	105 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF525	Q8N782	197 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	PLD5	Q8N7P1	536 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF454	Q8N9F8	522 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	SNX31	Q8N9S9	440 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	GOLM1	Q8NBJ4	401 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	B3GNT7	Q8NFL0	401 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	GSDMB	Q8TAX9	411 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF418	Q8TF45	676 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	FAM168A	Q92567	244 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	UCN3	Q969E3	161 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	TADA1	Q96BN2	335 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	SGCZ	Q96LD1	299 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ZFP3	Q96NJ6	502 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	RASL10B	Q96S79	203 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	KRT12	Q99456	494 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	SLC30A3	Q99726	388 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	TM9SF2	Q99805	663 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	TMEM204	Q9BSN7	226 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	NTMT1	Q9BV86	223 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	FICD	Q9BVA6	458 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	RBM4	Q9BWF3	364 aa	Known RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	TRIM5	Q9C035	493 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ACBD3	Q9H3P7	528 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	GOLPH3	Q9H4A6	298 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	C10orf88	Q9H8K7	445 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	GLOD4	Q9HC38	313 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ANKH	Q9HCJ1	492 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	MRPS30	Q9NP92	439 aa	Known RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ZFP64	Q9NPA5	681 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ARL15	Q9NXU5	204 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	SAE1	Q9UBE0	346 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	PCYOX1	Q9UHG3	505 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF223	Q9UK11	482 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	BOK	Q9UMX3	212 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	NENF	Q9UMX5	172 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	MAPRE3	Q9UPY8	281 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	SLC6A5	Q9Y345	797 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	HYDIN	Q4G0P3	5121 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	DOCK7	Q96N67	2140 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	IGLV3-16	A0A075B6K0	115 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602		A0A1W2PPV9	198 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	KRT87P	A6NCN2	255 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	FRG2C	A6NGY1	282 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF860	A6NHJ4	632 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	CCL22	O00626	93 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	PFDN6	O15212	129 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	PIN1P1	O15428	100 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	CLOCK	O15516	846 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	PSTPIP1	O43586	416 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	NRDC	O43847	1150 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	CST8	O60676	142 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	TRAPPC6A	O75865	159 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	TNFSF13	O75888	250 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	MYO1D	O94832	1006 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	FTH1	P02794	183 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	THBD	P07204	575 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	FH	P07954	510 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	PRSS56	P0CW18	603 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	CYP4B1	P13584	511 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	PKM	P14618	531 aa	Known RBP	4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	PECAM1	P16284	738 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	IL10	P22301	178 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	JAK1	P23458	1154 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	ACRV1	P26436	265 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	GDF1	P27539	372 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	CD68	P34810	354 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	MARCKSL1	P49006	195 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	PCYT1A	P49585	367 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	WNT3A	P56704	352 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	EEF1A1	P68104	462 aa	Known RBP	4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	BTG2	P78543	158 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	MEF2A	Q02078	507 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	HSPA14	Q0VDF9	509 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	MPP3	Q13368	585 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	GGTLC2	Q14390	218 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	VAX1	Q5SQQ9	334 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	PRAMEF20	Q5VT98	475 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	EEF1A1P5	Q5VTE0	462 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	ADAM5	Q6NVV9	412 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	TTC23L	Q6PF05	361 aa		4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	DARS2	Q6PI48	645 aa	Known RBP	4.89	□□□□□ -1.63
SEC13-219	ENST00000492602	TAS2R42	Q7RTR8	314 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms